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        Module&nbsp;STMWindowApplet
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<h1 class="epydoc">Source Code for <a href="p4vasp.applet.STMWindowApplet-module.html">Module p4vasp.applet.STMWindowApplet</a></h1>
<pre class="py-src">
<a name="L1"></a><tt class="py-lineno">  1</tt>  <tt class="py-line"><tt class="py-comment">#!/usr/bin/python</tt> </tt>
<a name="L2"></a><tt class="py-lineno">  2</tt>  <tt class="py-line"> </tt>
<a name="L3"></a><tt class="py-lineno">  3</tt>  <tt class="py-line"><tt class="py-comment">#  p4vasp is a GUI-program and a library for processing outputs of the</tt> </tt>
<a name="L4"></a><tt class="py-lineno">  4</tt>  <tt class="py-line"><tt class="py-comment">#  Vienna Ab-inition Simulation Package (VASP)</tt> </tt>
<a name="L5"></a><tt class="py-lineno">  5</tt>  <tt class="py-line"><tt class="py-comment">#  (see http://cms.mpi.univie.ac.at/vasp/Welcome.html)</tt> </tt>
<a name="L6"></a><tt class="py-lineno">  6</tt>  <tt class="py-line"><tt class="py-comment">#</tt> </tt>
<a name="L7"></a><tt class="py-lineno">  7</tt>  <tt class="py-line"><tt class="py-comment">#  Copyright (C) 2003  Orest Dubay &lt;odubay@users.sourceforge.net&gt;</tt> </tt>
<a name="L8"></a><tt class="py-lineno">  8</tt>  <tt class="py-line"><tt class="py-comment">#</tt> </tt>
<a name="L9"></a><tt class="py-lineno">  9</tt>  <tt class="py-line"><tt class="py-comment">#  This program is free software; you can redistribute it and/or modify</tt> </tt>
<a name="L10"></a><tt class="py-lineno"> 10</tt>  <tt class="py-line"><tt class="py-comment">#  it under the terms of the GNU General Public License as published by</tt> </tt>
<a name="L11"></a><tt class="py-lineno"> 11</tt>  <tt class="py-line"><tt class="py-comment">#  the Free Software Foundation; either version 2 of the License, or</tt> </tt>
<a name="L12"></a><tt class="py-lineno"> 12</tt>  <tt class="py-line"><tt class="py-comment">#  (at your option) any later version.</tt> </tt>
<a name="L13"></a><tt class="py-lineno"> 13</tt>  <tt class="py-line"><tt class="py-comment">#</tt> </tt>
<a name="L14"></a><tt class="py-lineno"> 14</tt>  <tt class="py-line"><tt class="py-comment">#  This program is distributed in the hope that it will be useful,</tt> </tt>
<a name="L15"></a><tt class="py-lineno"> 15</tt>  <tt class="py-line"><tt class="py-comment">#  but WITHOUT ANY WARRANTY; without even the implied warranty of</tt> </tt>
<a name="L16"></a><tt class="py-lineno"> 16</tt>  <tt class="py-line"><tt class="py-comment">#  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the</tt> </tt>
<a name="L17"></a><tt class="py-lineno"> 17</tt>  <tt class="py-line"><tt class="py-comment">#  GNU General Public License for more details.</tt> </tt>
<a name="L18"></a><tt class="py-lineno"> 18</tt>  <tt class="py-line"><tt class="py-comment">#</tt> </tt>
<a name="L19"></a><tt class="py-lineno"> 19</tt>  <tt class="py-line"><tt class="py-comment">#   You should have received a copy of the GNU General Public License</tt> </tt>
<a name="L20"></a><tt class="py-lineno"> 20</tt>  <tt class="py-line"><tt class="py-comment">#  along with this program; if not, write to the Free Software</tt> </tt>
<a name="L21"></a><tt class="py-lineno"> 21</tt>  <tt class="py-line"><tt class="py-comment">#  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA</tt> </tt>
<a name="L22"></a><tt class="py-lineno"> 22</tt>  <tt class="py-line"> </tt>
<a name="L23"></a><tt class="py-lineno"> 23</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">__future__</tt> <tt class="py-keyword">import</tt> <tt class="py-name">generators</tt> </tt>
<a name="L24"></a><tt class="py-lineno"> 24</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-0" class="py-name" targets="Package p4vasp=p4vasp-module.html"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-0', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-1" class="py-name" targets="Module p4vasp.StructureWindow=p4vasp.StructureWindow-module.html,Class p4vasp.StructureWindow.StructureWindow=p4vasp.StructureWindow.StructureWindow-class.html"><a title="p4vasp.StructureWindow
p4vasp.StructureWindow.StructureWindow" class="py-name" href="#" onclick="return doclink('link-1', 'StructureWindow', 'link-1');">StructureWindow</a></tt> <tt class="py-keyword">import</tt> <tt class="py-op">*</tt> </tt>
<a name="L25"></a><tt class="py-lineno"> 25</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-2" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-2', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-3" class="py-name" targets="Module p4vasp.store=p4vasp.store-module.html"><a title="p4vasp.store" class="py-name" href="#" onclick="return doclink('link-3', 'store', 'link-3');">store</a></tt> <tt class="py-keyword">import</tt> <tt class="py-op">*</tt> </tt>
<a name="L26"></a><tt class="py-lineno"> 26</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-4" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-4', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-5" class="py-name" targets="Package p4vasp.applet=p4vasp.applet-module.html"><a title="p4vasp.applet" class="py-name" href="#" onclick="return doclink('link-5', 'applet', 'link-5');">applet</a></tt><tt class="py-op">.</tt><tt id="link-6" class="py-name" targets="Module p4vasp.applet.Applet=p4vasp.applet.Applet-module.html,Class p4vasp.applet.Applet.Applet=p4vasp.applet.Applet.Applet-class.html"><a title="p4vasp.applet.Applet
p4vasp.applet.Applet.Applet" class="py-name" href="#" onclick="return doclink('link-6', 'Applet', 'link-6');">Applet</a></tt> <tt class="py-keyword">import</tt> <tt class="py-op">*</tt> </tt>
<a name="L27"></a><tt class="py-lineno"> 27</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-7" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-7', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-8" class="py-name"><a title="p4vasp.applet" class="py-name" href="#" onclick="return doclink('link-8', 'applet', 'link-5');">applet</a></tt><tt class="py-op">.</tt><tt id="link-9" class="py-name" targets="Module p4vasp.applet.StructureWindowApplet=p4vasp.applet.StructureWindowApplet-module.html,Class p4vasp.applet.StructureWindowApplet.StructureWindowApplet=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html"><a title="p4vasp.applet.StructureWindowApplet
p4vasp.applet.StructureWindowApplet.StructureWindowApplet" class="py-name" href="#" onclick="return doclink('link-9', 'StructureWindowApplet', 'link-9');">StructureWindowApplet</a></tt> <tt class="py-keyword">import</tt> <tt id="link-10" class="py-name"><a title="p4vasp.applet.StructureWindowApplet
p4vasp.applet.StructureWindowApplet.StructureWindowApplet" class="py-name" href="#" onclick="return doclink('link-10', 'StructureWindowApplet', 'link-9');">StructureWindowApplet</a></tt> </tt>
<a name="L28"></a><tt class="py-lineno"> 28</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt id="link-11" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-11', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-12" class="py-name" targets="Module p4vasp.util=p4vasp.util-module.html"><a title="p4vasp.util" class="py-name" href="#" onclick="return doclink('link-12', 'util', 'link-12');">util</a></tt> <tt class="py-keyword">import</tt> <tt id="link-13" class="py-name" targets="Function p4vasp.util.getAtomtypes()=p4vasp.util-module.html#getAtomtypes"><a title="p4vasp.util.getAtomtypes" class="py-name" href="#" onclick="return doclink('link-13', 'getAtomtypes', 'link-13');">getAtomtypes</a></tt> </tt>
<a name="L29"></a><tt class="py-lineno"> 29</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt id="link-14" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-14', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-15" class="py-name" targets="Module p4vasp.Structure=p4vasp.Structure-module.html,Class p4vasp.Structure.Structure=p4vasp.Structure.Structure-class.html,Class p4vasp.cStructure.Structure=p4vasp.cStructure.Structure-class.html"><a title="p4vasp.Structure
p4vasp.Structure.Structure
p4vasp.cStructure.Structure" class="py-name" href="#" onclick="return doclink('link-15', 'Structure', 'link-15');">Structure</a></tt> </tt>
<a name="L30"></a><tt class="py-lineno"> 30</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt id="link-16" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-16', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-17" class="py-name" targets="Module p4vasp.cStructure=p4vasp.cStructure-module.html"><a title="p4vasp.cStructure" class="py-name" href="#" onclick="return doclink('link-17', 'cStructure', 'link-17');">cStructure</a></tt> </tt>
<a name="L31"></a><tt class="py-lineno"> 31</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt id="link-18" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-18', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-19" class="py-name" targets="Module p4vasp.cmatrix=p4vasp.cmatrix-module.html"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-19', 'cmatrix', 'link-19');">cmatrix</a></tt> <tt class="py-keyword">as</tt> <tt id="link-20" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-20', 'cmatrix', 'link-19');">cmatrix</a></tt> </tt>
<a name="L32"></a><tt class="py-lineno"> 32</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt id="link-21" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-21', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-22" class="py-name" targets="Module p4vasp.Selection=p4vasp.Selection-module.html,Class p4vasp.Selection.Selection=p4vasp.Selection.Selection-class.html"><a title="p4vasp.Selection
p4vasp.Selection.Selection" class="py-name" href="#" onclick="return doclink('link-22', 'Selection', 'link-22');">Selection</a></tt> </tt>
<a name="L33"></a><tt class="py-lineno"> 33</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet"></a><div id="STMWindowApplet-def"><a name="L34"></a><tt class="py-lineno"> 34</tt> <a class="py-toggle" href="#" id="STMWindowApplet-toggle" onclick="return toggle('STMWindowApplet');">-</a><tt class="py-line"><tt class="py-keyword">class</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html">STMWindowApplet</a><tt class="py-op">(</tt><tt class="py-base-class">Applet</tt><tt class="py-op">,</tt><tt class="py-base-class">p4vasp</tt><tt class="py-op">.</tt><tt class="py-base-class">Selection</tt><tt class="py-op">.</tt><tt class="py-base-class">SelectionListener</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet-collapsed" style="display:none;" pad="+++" indent="++++"></div><div id="STMWindowApplet-expanded"><a name="L35"></a><tt class="py-lineno"> 35</tt>  <tt class="py-line">    <tt id="link-23" class="py-name" targets="Variable p4vasp.applet.Applet.Applet.menupath=p4vasp.applet.Applet.Applet-class.html#menupath,Variable p4vasp.applet.BuilderApplet.BuilderApplet.menupath=p4vasp.applet.BuilderApplet.BuilderApplet-class.html#menupath,Variable p4vasp.applet.CommitApplet.CommitApplet.menupath=p4vasp.applet.CommitApplet.CommitApplet-class.html#menupath,Variable p4vasp.applet.DBApplet.DBApplet.menupath=p4vasp.applet.DBApplet.DBApplet-class.html#menupath,Variable p4vasp.applet.DielectricApplet.DielectricApplet.menupath=p4vasp.applet.DielectricApplet.DielectricApplet-class.html#menupath,Variable p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet.menupath=p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet-class.html#menupath,Variable p4vasp.applet.ElectronicApplet.ElectronicApplet.menupath=p4vasp.applet.ElectronicApplet.ElectronicApplet-class.html#menupath,Variable p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet.menupath=p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet-class.html#menupath,Variable p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet.menupath=p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet-class.html#menupath,Variable p4vasp.applet.ExportApplet.ExportApplet.menupath=p4vasp.applet.ExportApplet.ExportApplet-class.html#menupath,Variable p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet.menupath=p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet-class.html#menupath,Variable p4vasp.applet.InfoApplet.InfoApplet.menupath=p4vasp.applet.InfoApplet.InfoApplet-class.html#menupath,Variable p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet.menupath=p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet-class.html#menupath,Variable p4vasp.applet.LatticeApplet.LatticeApplet.menupath=p4vasp.applet.LatticeApplet.LatticeApplet-class.html#menupath,Variable p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet.menupath=p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet-class.html#menupath,Variable p4vasp.applet.MeasureApplet.MeasureApplet.menupath=p4vasp.applet.MeasureApplet.MeasureApplet-class.html#menupath,Variable p4vasp.applet.MoveApplet.MoveApplet.menupath=p4vasp.applet.MoveApplet.MoveApplet-class.html#menupath,Variable p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet.menupath=p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet-class.html#menupath,Variable p4vasp.applet.NewApplet.NewApplet.menupath=p4vasp.applet.NewApplet.NewApplet-class.html#menupath,Variable p4vasp.applet.RotateApplet.RotateApplet.menupath=p4vasp.applet.RotateApplet.RotateApplet-class.html#menupath,Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.menupath=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#menupath,Variable p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.menupath=p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet-class.html#menupath,Variable p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet.menupath=p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet-class.html#menupath,Variable p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.menupath=p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet-class.html#menupath,Variable p4vasp.applet.StructureApplet.StructureApplet.menupath=p4vasp.applet.StructureApplet.StructureApplet-class.html#menupath,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.menupath=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#menupath,Variable p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.menupath=p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet-class.html#menupath,Variable p4vasp.applet.VACApplet.VACApplet.menupath=p4vasp.applet.VACApplet.VACApplet-class.html#menupath"><a title="p4vasp.applet.Applet.Applet.menupath
p4vasp.applet.BuilderApplet.BuilderApplet.menupath
p4vasp.applet.CommitApplet.CommitApplet.menupath
p4vasp.applet.DBApplet.DBApplet.menupath
p4vasp.applet.DielectricApplet.DielectricApplet.menupath
p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet.menupath
p4vasp.applet.ElectronicApplet.ElectronicApplet.menupath
p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet.menupath
p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet.menupath
p4vasp.applet.ExportApplet.ExportApplet.menupath
p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet.menupath
p4vasp.applet.InfoApplet.InfoApplet.menupath
p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet.menupath
p4vasp.applet.LatticeApplet.LatticeApplet.menupath
p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet.menupath
p4vasp.applet.MeasureApplet.MeasureApplet.menupath
p4vasp.applet.MoveApplet.MoveApplet.menupath
p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet.menupath
p4vasp.applet.NewApplet.NewApplet.menupath
p4vasp.applet.RotateApplet.RotateApplet.menupath
p4vasp.applet.STMWindowApplet.STMWindowApplet.menupath
p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.menupath
p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet.menupath
p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.menupath
p4vasp.applet.StructureApplet.StructureApplet.menupath
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.menupath
p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.menupath
p4vasp.applet.VACApplet.VACApplet.menupath" class="py-name" href="#" onclick="return doclink('link-23', 'menupath', 'link-23');">menupath</a></tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-string">"Electronic"</tt><tt class="py-op">,</tt><tt class="py-string">"STM Window"</tt><tt class="py-op">]</tt> </tt>
<a name="L36"></a><tt class="py-lineno"> 36</tt>  <tt class="py-line">    <tt id="link-24" class="py-name" targets="Variable p4vasp.applet.Applet.Applet.showmode=p4vasp.applet.Applet.Applet-class.html#showmode,Variable p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet.showmode=p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet-class.html#showmode,Variable p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet.showmode=p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet-class.html#showmode,Variable p4vasp.applet.ExportApplet.ExportApplet.showmode=p4vasp.applet.ExportApplet.ExportApplet-class.html#showmode,Variable p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet.showmode=p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet-class.html#showmode,Variable p4vasp.applet.LatticeApplet.LatticeApplet.showmode=p4vasp.applet.LatticeApplet.LatticeApplet-class.html#showmode,Variable p4vasp.applet.MoveApplet.MoveApplet.showmode=p4vasp.applet.MoveApplet.MoveApplet-class.html#showmode,Variable p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet.showmode=p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet-class.html#showmode,Variable p4vasp.applet.RotateApplet.RotateApplet.showmode=p4vasp.applet.RotateApplet.RotateApplet-class.html#showmode,Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.showmode=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#showmode,Variable p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.showmode=p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet-class.html#showmode,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.showmode=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#showmode"><a title="p4vasp.applet.Applet.Applet.showmode
p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet.showmode
p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet.showmode
p4vasp.applet.ExportApplet.ExportApplet.showmode
p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet.showmode
p4vasp.applet.LatticeApplet.LatticeApplet.showmode
p4vasp.applet.MoveApplet.MoveApplet.showmode
p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet.showmode
p4vasp.applet.RotateApplet.RotateApplet.showmode
p4vasp.applet.STMWindowApplet.STMWindowApplet.showmode
p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.showmode
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.showmode" class="py-name" href="#" onclick="return doclink('link-24', 'showmode', 'link-24');">showmode</a></tt><tt class="py-op">=</tt><tt id="link-25" class="py-name"><a title="p4vasp.applet.Applet
p4vasp.applet.Applet.Applet" class="py-name" href="#" onclick="return doclink('link-25', 'Applet', 'link-6');">Applet</a></tt><tt class="py-op">.</tt><tt id="link-26" class="py-name" targets="Variable p4vasp.applet.Applet.Applet.EXTERNAL_ONLY_MODE=p4vasp.applet.Applet.Applet-class.html#EXTERNAL_ONLY_MODE"><a title="p4vasp.applet.Applet.Applet.EXTERNAL_ONLY_MODE" class="py-name" href="#" onclick="return doclink('link-26', 'EXTERNAL_ONLY_MODE', 'link-26');">EXTERNAL_ONLY_MODE</a></tt> </tt>
<a name="L37"></a><tt class="py-lineno"> 37</tt>  <tt class="py-line">    <tt id="link-27" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_OTHER=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#CLAMP_OTHER"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_OTHER" class="py-name" href="#" onclick="return doclink('link-27', 'CLAMP_OTHER', 'link-27');">CLAMP_OTHER</a></tt><tt class="py-op">=</tt><tt class="py-op">-</tt><tt class="py-number">1</tt> </tt>
<a name="L38"></a><tt class="py-lineno"> 38</tt>  <tt class="py-line">    <tt id="link-28" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_THRESHOLD=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#CLAMP_THRESHOLD"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_THRESHOLD" class="py-name" href="#" onclick="return doclink('link-28', 'CLAMP_THRESHOLD', 'link-28');">CLAMP_THRESHOLD</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L39"></a><tt class="py-lineno"> 39</tt>  <tt class="py-line">    <tt id="link-29" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_COS=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#CLAMP_COS"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_COS" class="py-name" href="#" onclick="return doclink('link-29', 'CLAMP_COS', 'link-29');">CLAMP_COS</a></tt><tt class="py-op">=</tt><tt class="py-number">1</tt> </tt>
<a name="L40"></a><tt class="py-lineno"> 40</tt>  <tt class="py-line">    <tt id="link-30" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_ATAN=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#CLAMP_ATAN"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_ATAN" class="py-name" href="#" onclick="return doclink('link-30', 'CLAMP_ATAN', 'link-30');">CLAMP_ATAN</a></tt><tt class="py-op">=</tt><tt class="py-number">2</tt> </tt>
<a name="L41"></a><tt class="py-lineno"> 41</tt>  <tt class="py-line">    <tt id="link-31" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_FERMI=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#CLAMP_FERMI"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_FERMI" class="py-name" href="#" onclick="return doclink('link-31', 'CLAMP_FERMI', 'link-31');">CLAMP_FERMI</a></tt><tt class="py-op">=</tt><tt class="py-number">3</tt> </tt>
<a name="L42"></a><tt class="py-lineno"> 42</tt>  <tt class="py-line"> </tt>
<a name="L43"></a><tt class="py-lineno"> 43</tt>  <tt class="py-line">    <tt id="link-32" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.NONE_SEQUENCE=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#NONE_SEQUENCE,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.NONE_SEQUENCE=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#NONE_SEQUENCE"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.NONE_SEQUENCE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.NONE_SEQUENCE" class="py-name" href="#" onclick="return doclink('link-32', 'NONE_SEQUENCE', 'link-32');">NONE_SEQUENCE</a></tt>        <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L44"></a><tt class="py-lineno"> 44</tt>  <tt class="py-line">    <tt id="link-33" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.INITIAL_SEQUENCE=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#INITIAL_SEQUENCE,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.INITIAL_SEQUENCE=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#INITIAL_SEQUENCE"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.INITIAL_SEQUENCE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.INITIAL_SEQUENCE" class="py-name" href="#" onclick="return doclink('link-33', 'INITIAL_SEQUENCE', 'link-33');">INITIAL_SEQUENCE</a></tt>     <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L45"></a><tt class="py-lineno"> 45</tt>  <tt class="py-line">    <tt id="link-34" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.FINAL_SEQUENCE=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#FINAL_SEQUENCE,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.FINAL_SEQUENCE=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#FINAL_SEQUENCE"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.FINAL_SEQUENCE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.FINAL_SEQUENCE" class="py-name" href="#" onclick="return doclink('link-34', 'FINAL_SEQUENCE', 'link-34');">FINAL_SEQUENCE</a></tt>       <tt class="py-op">=</tt> <tt class="py-number">2</tt> </tt>
<a name="L46"></a><tt class="py-lineno"> 46</tt>  <tt class="py-line">    <tt id="link-35" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.UNDEFINED_SEQUENCE=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#UNDEFINED_SEQUENCE,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.UNDEFINED_SEQUENCE=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#UNDEFINED_SEQUENCE"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.UNDEFINED_SEQUENCE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.UNDEFINED_SEQUENCE" class="py-name" href="#" onclick="return doclink('link-35', 'UNDEFINED_SEQUENCE', 'link-35');">UNDEFINED_SEQUENCE</a></tt>   <tt class="py-op">=</tt> <tt class="py-number">3</tt> </tt>
<a name="L47"></a><tt class="py-lineno"> 47</tt>  <tt class="py-line">    <tt id="link-36" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.RELAXATION_SEQUENCE=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#RELAXATION_SEQUENCE,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.RELAXATION_SEQUENCE=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#RELAXATION_SEQUENCE"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.RELAXATION_SEQUENCE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.RELAXATION_SEQUENCE" class="py-name" href="#" onclick="return doclink('link-36', 'RELAXATION_SEQUENCE', 'link-36');">RELAXATION_SEQUENCE</a></tt>  <tt class="py-op">=</tt> <tt class="py-number">4</tt> </tt>
<a name="L48"></a><tt class="py-lineno"> 48</tt>  <tt class="py-line">    <tt id="link-37" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.MD_SEQUENCE=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#MD_SEQUENCE,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.MD_SEQUENCE=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#MD_SEQUENCE"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.MD_SEQUENCE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.MD_SEQUENCE" class="py-name" href="#" onclick="return doclink('link-37', 'MD_SEQUENCE', 'link-37');">MD_SEQUENCE</a></tt>          <tt class="py-op">=</tt> <tt class="py-number">5</tt> </tt>
<a name="L49"></a><tt class="py-lineno"> 49</tt>  <tt class="py-line"> </tt>
<a name="L50"></a><tt class="py-lineno"> 50</tt>  <tt class="py-line">    <tt id="link-38" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.NONE_ARROWS=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#NONE_ARROWS,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.NONE_ARROWS=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#NONE_ARROWS"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.NONE_ARROWS
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.NONE_ARROWS" class="py-name" href="#" onclick="return doclink('link-38', 'NONE_ARROWS', 'link-38');">NONE_ARROWS</a></tt>          <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L51"></a><tt class="py-lineno"> 51</tt>  <tt class="py-line">    <tt id="link-39" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.FORCES_ARROWS=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#FORCES_ARROWS,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.FORCES_ARROWS=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#FORCES_ARROWS"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.FORCES_ARROWS
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.FORCES_ARROWS" class="py-name" href="#" onclick="return doclink('link-39', 'FORCES_ARROWS', 'link-39');">FORCES_ARROWS</a></tt>        <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L52"></a><tt class="py-lineno"> 52</tt>  <tt class="py-line">    <tt id="link-40" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.DIFF_INITIAL_ARROWS=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#DIFF_INITIAL_ARROWS,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.DIFF_INITIAL_ARROWS=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#DIFF_INITIAL_ARROWS"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.DIFF_INITIAL_ARROWS
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.DIFF_INITIAL_ARROWS" class="py-name" href="#" onclick="return doclink('link-40', 'DIFF_INITIAL_ARROWS', 'link-40');">DIFF_INITIAL_ARROWS</a></tt>  <tt class="py-op">=</tt> <tt class="py-number">2</tt> </tt>
<a name="L53"></a><tt class="py-lineno"> 53</tt>  <tt class="py-line">    <tt id="link-41" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.DIFF_FINAL_ARROWS=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#DIFF_FINAL_ARROWS,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.DIFF_FINAL_ARROWS=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#DIFF_FINAL_ARROWS"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.DIFF_FINAL_ARROWS
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.DIFF_FINAL_ARROWS" class="py-name" href="#" onclick="return doclink('link-41', 'DIFF_FINAL_ARROWS', 'link-41');">DIFF_FINAL_ARROWS</a></tt>    <tt class="py-op">=</tt> <tt class="py-number">3</tt> </tt>
<a name="L54"></a><tt class="py-lineno"> 54</tt>  <tt class="py-line">    <tt id="link-42" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.DIFF_PREVIOUS_ARROWS=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#DIFF_PREVIOUS_ARROWS,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.DIFF_PREVIOUS_ARROWS=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#DIFF_PREVIOUS_ARROWS"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.DIFF_PREVIOUS_ARROWS
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.DIFF_PREVIOUS_ARROWS" class="py-name" href="#" onclick="return doclink('link-42', 'DIFF_PREVIOUS_ARROWS', 'link-42');">DIFF_PREVIOUS_ARROWS</a></tt> <tt class="py-op">=</tt> <tt class="py-number">4</tt> </tt>
<a name="L55"></a><tt class="py-lineno"> 55</tt>  <tt class="py-line">    <tt id="link-43" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.DIFF_NEXT_ARROWS=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#DIFF_NEXT_ARROWS,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.DIFF_NEXT_ARROWS=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#DIFF_NEXT_ARROWS"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.DIFF_NEXT_ARROWS
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.DIFF_NEXT_ARROWS" class="py-name" href="#" onclick="return doclink('link-43', 'DIFF_NEXT_ARROWS', 'link-43');">DIFF_NEXT_ARROWS</a></tt>     <tt class="py-op">=</tt> <tt class="py-number">5</tt> </tt>
<a name="L56"></a><tt class="py-lineno"> 56</tt>  <tt class="py-line">    <tt id="link-44" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.PHONON_ARROWS=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#PHONON_ARROWS,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.PHONON_ARROWS=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#PHONON_ARROWS"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.PHONON_ARROWS
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.PHONON_ARROWS" class="py-name" href="#" onclick="return doclink('link-44', 'PHONON_ARROWS', 'link-44');">PHONON_ARROWS</a></tt>        <tt class="py-op">=</tt> <tt class="py-number">6</tt> </tt>
<a name="L57"></a><tt class="py-lineno"> 57</tt>  <tt class="py-line"> </tt>
<a name="L58"></a><tt class="py-lineno"> 58</tt>  <tt class="py-line">    <tt id="link-45" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.CELL_CENTERING_NONE=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#CELL_CENTERING_NONE,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.CELL_CENTERING_NONE=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#CELL_CENTERING_NONE"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CELL_CENTERING_NONE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.CELL_CENTERING_NONE" class="py-name" href="#" onclick="return doclink('link-45', 'CELL_CENTERING_NONE', 'link-45');">CELL_CENTERING_NONE</a></tt>   <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L59"></a><tt class="py-lineno"> 59</tt>  <tt class="py-line">    <tt id="link-46" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.CELL_CENTERING_INSIDE=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#CELL_CENTERING_INSIDE,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.CELL_CENTERING_INSIDE=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#CELL_CENTERING_INSIDE"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CELL_CENTERING_INSIDE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.CELL_CENTERING_INSIDE" class="py-name" href="#" onclick="return doclink('link-46', 'CELL_CENTERING_INSIDE', 'link-46');">CELL_CENTERING_INSIDE</a></tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L60"></a><tt class="py-lineno"> 60</tt>  <tt class="py-line">    <tt id="link-47" class="py-name" targets="Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.CELL_CENTERING_ZERO=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#CELL_CENTERING_ZERO,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.CELL_CENTERING_ZERO=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#CELL_CENTERING_ZERO"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CELL_CENTERING_ZERO
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.CELL_CENTERING_ZERO" class="py-name" href="#" onclick="return doclink('link-47', 'CELL_CENTERING_ZERO', 'link-47');">CELL_CENTERING_ZERO</a></tt>   <tt class="py-op">=</tt> <tt class="py-number">2</tt> </tt>
<a name="L61"></a><tt class="py-lineno"> 61</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.__init__"></a><div id="STMWindowApplet.__init__-def"><a name="L62"></a><tt class="py-lineno"> 62</tt> <a class="py-toggle" href="#" id="STMWindowApplet.__init__-toggle" onclick="return toggle('STMWindowApplet.__init__');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#__init__">__init__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.__init__-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.__init__-expanded"><a name="L63"></a><tt class="py-lineno"> 63</tt>  <tt class="py-line">        <tt id="link-48" class="py-name"><a title="p4vasp.applet.Applet
p4vasp.applet.Applet.Applet" class="py-name" href="#" onclick="return doclink('link-48', 'Applet', 'link-6');">Applet</a></tt><tt class="py-op">.</tt><tt id="link-49" class="py-name" targets="Method p4vasp.Array.Array.__init__()=p4vasp.Array.Array-class.html#__init__,Method p4vasp.Array.ArrayRecord.__init__()=p4vasp.Array.ArrayRecord-class.html#__init__,Method p4vasp.Array.LateList.__init__()=p4vasp.Array.LateList-class.html#__init__,Method p4vasp.Array.SetLateList.__init__()=p4vasp.Array.SetLateList-class.html#__init__,Method p4vasp.Array.VArray.__init__()=p4vasp.Array.VArray-class.html#__init__,Method p4vasp.Array.rRecordSetLateList.__init__()=p4vasp.Array.rRecordSetLateList-class.html#__init__,Method p4vasp.Array.rcRecordSetLateList.__init__()=p4vasp.Array.rcRecordSetLateList-class.html#__init__,Method p4vasp.ConvexShape.ConvexShape.__init__()=p4vasp.ConvexShape.ConvexShape-class.html#__init__,Method p4vasp.Dictionary.Dictionary.__init__()=p4vasp.Dictionary.Dictionary-class.html#__init__,Method p4vasp.Dictionary.Incar.__init__()=p4vasp.Dictionary.Incar-class.html#__init__,Method p4vasp.Dictionary.StructuredDictionary.__init__()=p4vasp.Dictionary.StructuredDictionary-class.html#__init__,Method p4vasp.FArray.FArray1D.__init__()=p4vasp.FArray.FArray1D-class.html#__init__,Method p4vasp.FArray.FArray2D.__init__()=p4vasp.FArray.FArray2D-class.html#__init__,Method p4vasp.GraphCanvas.Export.__init__()=p4vasp.GraphCanvas.Export-class.html#__init__,Method p4vasp.GraphCanvas.GraphCanvas.__init__()=p4vasp.GraphCanvas.GraphCanvas-class.html#__init__,Method p4vasp.GraphCanvas.GraphCanvasWindow.__init__()=p4vasp.GraphCanvas.GraphCanvasWindow-class.html#__init__,Method p4vasp.GraphCanvas_gtk1.Export.__init__()=p4vasp.GraphCanvas_gtk1.Export-class.html#__init__,Method p4vasp.GraphCanvas_gtk1.GraphCanvas.__init__()=p4vasp.GraphCanvas_gtk1.GraphCanvas-class.html#__init__,Method p4vasp.GraphCanvas_gtk1.GraphCanvasWindow.__init__()=p4vasp.GraphCanvas_gtk1.GraphCanvasWindow-class.html#__init__,Method p4vasp.GraphPM.GraphPM.__init__()=p4vasp.GraphPM.GraphPM-class.html#__init__,Method p4vasp.GraphPM.GraphProperty.__init__()=p4vasp.GraphPM.GraphProperty-class.html#__init__,Method p4vasp.ODPdom.Attr.__init__()=p4vasp.ODPdom.Attr-class.html#__init__,Method p4vasp.ODPdom.AttributeList.__init__()=p4vasp.ODPdom.AttributeList-class.html#__init__,Method p4vasp.ODPdom.CharacterData.__init__()=p4vasp.ODPdom.CharacterData-class.html#__init__,Method p4vasp.ODPdom.ChildrenByTagNameList.__init__()=p4vasp.ODPdom.ChildrenByTagNameList-class.html#__init__,Method p4vasp.ODPdom.DOMException.__init__()=p4vasp.ODPdom.DOMException-class.html#__init__,Method p4vasp.ODPdom.Document.__init__()=p4vasp.ODPdom.Document-class.html#__init__,Method p4vasp.ODPdom.Element.__init__()=p4vasp.ODPdom.Element-class.html#__init__,Method p4vasp.ODPdom.NamedNodeMap.__init__()=p4vasp.ODPdom.NamedNodeMap-class.html#__init__,Method p4vasp.ODPdom.Node.__init__()=p4vasp.ODPdom.Node-class.html#__init__,Method p4vasp.ODPdom.NodeList.__init__()=p4vasp.ODPdom.NodeList-class.html#__init__,Method p4vasp.ODPdom.ProcessingInstruction.__init__()=p4vasp.ODPdom.ProcessingInstruction-class.html#__init__,Method p4vasp.Property.FilterPropertyManager.__init__()=p4vasp.Property.FilterPropertyManager-class.html#__init__,Method p4vasp.Property.Property.__init__()=p4vasp.Property.Property-class.html#__init__,Method p4vasp.Property.PropertyManager.__init__()=p4vasp.Property.PropertyManager-class.html#__init__,Method p4vasp.SQLSystemPM.SQLForcesSequenceLateList.__init__()=p4vasp.SQLSystemPM.SQLForcesSequenceLateList-class.html#__init__,Method p4vasp.SQLSystemPM.SQLStructuresLL.__init__()=p4vasp.SQLSystemPM.SQLStructuresLL-class.html#__init__,Method p4vasp.SQLSystemPM.SQLSystemPM.__init__()=p4vasp.SQLSystemPM.SQLSystemPM-class.html#__init__,Method p4vasp.Selection.Selection.__init__()=p4vasp.Selection.Selection-class.html#__init__,Method p4vasp.Structure.AtomInfo.__init__()=p4vasp.Structure.AtomInfo-class.html#__init__,Method p4vasp.Structure.AtomtypesArray.__init__()=p4vasp.Structure.AtomtypesArray-class.html#__init__,Method p4vasp.Structure.AtomtypesRecord.__init__()=p4vasp.Structure.AtomtypesRecord-class.html#__init__,Method p4vasp.Structure.Structure.__init__()=p4vasp.Structure.Structure-class.html#__init__,Method p4vasp.StructureWindow.StructureWindow.__init__()=p4vasp.StructureWindow.StructureWindow-class.html#__init__,Method p4vasp.SystemPM.ChgcarStatisticsLateList.__init__()=p4vasp.SystemPM.ChgcarStatisticsLateList-class.html#__init__,Method p4vasp.SystemPM.KpointGeneration.__init__()=p4vasp.SystemPM.KpointGeneration-class.html#__init__,Method 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p4vasp.applet.StructureApplet.SubtrSequence.__init__
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.__init__
p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.__init__
p4vasp.applet.StructureWindowControlApplet.SubtrSequence.__init__
p4vasp.applet.VACApplet.VACApplet.__init__
p4vasp.cStructure.AtomInfo.__init__
p4vasp.cStructure.AtomtypesRecord.__init__
p4vasp.cStructure.SelectiveArrayItemWrapper.__init__
p4vasp.cStructure.SelectiveArrayWrapper.__init__
p4vasp.cStructure.Structure.__init__
p4vasp.cmatrix.Matrix.__init__
p4vasp.cmatrix.Vector.__init__
p4vasp.db.DBI.__init__
p4vasp.db.MySQLDBI.__init__
p4vasp.db.Query.__init__
p4vasp.db.SQLiteDBI.__init__
p4vasp.graph.Axis.__init__
p4vasp.graph.Graph.__init__
p4vasp.graph.GraphLine.__init__
p4vasp.graph.Set.__init__
p4vasp.graph.World.__init__
p4vasp.graph.XAxis.__init__
p4vasp.graph.YAxis.__init__
p4vasp.matrix.Matrix.__init__
p4vasp.matrix.Vector.__init__
p4vasp.message.MessageDriver.__init__
p4vasp.paint3d.ColladaPaint3D.ColladaEffectsPaint3D.__init__
p4vasp.paint3d.ColladaPaint3D.ColladaGeometriesPaint3D.__init__
p4vasp.paint3d.ColladaPaint3D.ColladaPaint3D.__init__
p4vasp.paint3d.ColladaPaint3D.ColladaScenePaint3D.__init__
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.__init__
p4vasp.paint3d.OpenGLPaint3D.GLUTPaint3D.__init__
p4vasp.paint3d.OpenGLPaint3D.OpenGLPaint3DFrame.__init__
p4vasp.paint3d.OpenGLPaint3D.OpenGLPaint3DRecorder.__init__
p4vasp.paint3d.Paint3DInterface.Paint3DInterface.__init__
p4vasp.paint3d.Paint3DInterface.Paint3DRecorder.__init__
p4vasp.paint3d.PovrayPaint3D.ExtendedPovrayPaint3D.__init__
p4vasp.paint3d.PovrayPaint3D.PovrayPaint3D.__init__
p4vasp.paint3d.PovrayPaint3D.PovrayPaint3DFrame.__init__
p4vasp.paint3d.data.AmbientLight.__init__
p4vasp.paint3d.data.Arrow.__init__
p4vasp.paint3d.data.Background.__init__
p4vasp.paint3d.data.ColorMaterial.__init__
p4vasp.paint3d.data.Cone.__init__
p4vasp.paint3d.data.Cylinder.__init__
p4vasp.paint3d.data.Frame.__init__
p4vasp.paint3d.data.Line.__init__
p4vasp.paint3d.data.Mesh.__init__
p4vasp.paint3d.data.OrthographicCamera.__init__
p4vasp.paint3d.data.PerspectiveCamera.__init__
p4vasp.paint3d.data.PointLight.__init__
p4vasp.paint3d.data.Sphere.__init__
p4vasp.repository.Descriptor.__init__
p4vasp.repository.DescriptorProfile.__init__
p4vasp.repository.Factory.__init__
p4vasp.repository.FactoryProfile.__init__
p4vasp.repository.Repository.__init__
p4vasp.repository.RepositoryProfile.__init__
p4vasp.schedule'.Scheduler.__init__
p4vasp.setupstore.SetupProfile.__init__
p4vasp.setupstore.SetupProfile_old.__init__
p4vasp.store.AttributeProfile.__init__
p4vasp.store.ClassAttribute.__init__
p4vasp.store.FloatAttribute.__init__
p4vasp.store.FloatListAttribute.__init__
p4vasp.store.FloatTupleAttribute.__init__
p4vasp.store.HexMarshalAttribute.__init__
p4vasp.store.HexPickleAttribute.__init__
p4vasp.store.IgnoreProfile.__init__
p4vasp.store.IntAttribute.__init__
p4vasp.store.IntListAttribute.__init__
p4vasp.store.IntTupleAttribute.__init__
p4vasp.store.ListAttribute.__init__
p4vasp.store.Profile.__init__
p4vasp.store.StringAttribute.__init__
p4vasp.store.StringListAttribute.__init__
p4vasp.util.ParseException.__init__
p4vasp.util.UnknownType.__init__
p4vasp.util.XMLParseException.__init__
p4vasp.uuid.UuidGen.__init__
p4vasp.uuid._GeneratorState.__init__" class="py-name" href="#" onclick="return doclink('link-49', '__init__', 'link-49');">__init__</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">)</tt> </tt>
<a name="L64"></a><tt class="py-lineno"> 64</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">win</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L65"></a><tt class="py-lineno"> 65</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L66"></a><tt class="py-lineno"> 66</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">=</tt><tt class="py-number">2</tt> </tt>
<a name="L67"></a><tt class="py-lineno"> 67</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-50" class="py-name" targets="Variable p4vasp.cmatrix.Matrix.n=p4vasp.cmatrix.Matrix-class.html#n,Variable p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n=p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D-class.html#n"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-50', 'n', 'link-50');">n</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L68"></a><tt class="py-lineno"> 68</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">=</tt><tt class="py-number">0.0</tt> </tt>
<a name="L69"></a><tt class="py-lineno"> 69</tt>  <tt class="py-line"><tt class="py-comment">#    self.sigmax=0</tt> </tt>
<a name="L70"></a><tt class="py-lineno"> 70</tt>  <tt class="py-line"><tt class="py-comment">#    self.sigmay=0</tt> </tt>
<a name="L71"></a><tt class="py-lineno"> 71</tt>  <tt class="py-line"><tt class="py-comment">#    self.sigmaz=0</tt> </tt>
<a name="L72"></a><tt class="py-lineno"> 72</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sh</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L73"></a><tt class="py-lineno"> 73</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sv</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L74"></a><tt class="py-lineno"> 74</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">n1</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L75"></a><tt class="py-lineno"> 75</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">n2</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L76"></a><tt class="py-lineno"> 76</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">n3</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L77"></a><tt class="py-lineno"> 77</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">chgname</tt><tt class="py-op">=</tt><tt class="py-string">"PARCHG"</tt> </tt>
<a name="L78"></a><tt class="py-lineno"> 78</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-51" class="py-name" targets="Method p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd()=p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet-class.html#sd"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-51', 'sd', 'link-51');">sd</a></tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L79"></a><tt class="py-lineno"> 79</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">lo</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L80"></a><tt class="py-lineno"> 80</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hi</tt><tt class="py-op">=</tt><tt class="py-number">1</tt> </tt>
<a name="L81"></a><tt class="py-lineno"> 81</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">inv</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L82"></a><tt class="py-lineno"> 82</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">navigator</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L83"></a><tt class="py-lineno"> 83</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp_type</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L84"></a><tt class="py-lineno"> 84</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L85"></a><tt class="py-lineno"> 85</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L86"></a><tt class="py-lineno"> 86</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L87"></a><tt class="py-lineno"> 87</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">minimum</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L88"></a><tt class="py-lineno"> 88</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">maximum</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L89"></a><tt class="py-lineno"> 89</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-52" class="py-name" targets="Function p4vasp.applet.MoveApplet.average()=p4vasp.applet.MoveApplet-module.html#average,Function p4vasp.applet.RotateApplet.average()=p4vasp.applet.RotateApplet-module.html#average"><a title="p4vasp.applet.MoveApplet.average
p4vasp.applet.RotateApplet.average" class="py-name" href="#" onclick="return doclink('link-52', 'average', 'link-52');">average</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L90"></a><tt class="py-lineno"> 90</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sigma</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L91"></a><tt class="py-lineno"> 91</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">src</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L92"></a><tt class="py-lineno"> 92</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L93"></a><tt class="py-lineno"> 93</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">interpolation</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L94"></a><tt class="py-lineno"> 94</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postinterpolation</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L95"></a><tt class="py-lineno"> 95</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postsigma</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L96"></a><tt class="py-lineno"> 96</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postn</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L97"></a><tt class="py-lineno"> 97</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">atomtypes</tt><tt class="py-op">=</tt><tt id="link-53" class="py-name"><a title="p4vasp.util.getAtomtypes" class="py-name" href="#" onclick="return doclink('link-53', 'getAtomtypes', 'link-13');">getAtomtypes</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L98"></a><tt class="py-lineno"> 98</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_offset</tt><tt class="py-op">=</tt><tt class="py-number">0.0</tt> </tt>
<a name="L99"></a><tt class="py-lineno"> 99</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">brightness</tt><tt class="py-op">=</tt><tt class="py-number">0.0</tt> </tt>
<a name="L100"></a><tt class="py-lineno">100</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">contrast</tt>  <tt class="py-op">=</tt><tt class="py-number">1.0</tt> </tt>
<a name="L101"></a><tt class="py-lineno">101</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">multiple</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L102"></a><tt class="py-lineno">102</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hide_atoms</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L103"></a><tt class="py-lineno">103</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b1</tt><tt class="py-op">=</tt><tt id="link-54" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-54', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-55" class="py-name" targets="Class p4vasp.cmatrix.Vector=p4vasp.cmatrix.Vector-class.html,Class p4vasp.matrix.Vector=p4vasp.matrix.Vector-class.html"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-55', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt> </tt>
<a name="L104"></a><tt class="py-lineno">104</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b2</tt><tt class="py-op">=</tt><tt id="link-56" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-56', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-57" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-57', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt> </tt>
<a name="L105"></a><tt class="py-lineno">105</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bz</tt><tt class="py-op">=</tt><tt id="link-58" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-58', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-59" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-59', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt> </tt>
<a name="L106"></a><tt class="py-lineno">106</tt>  <tt class="py-line"> </tt>
<a name="L107"></a><tt class="py-lineno">107</tt>  <tt class="py-line">        <tt class="py-comment">#DUMMY ATTRIBUTES -for compatibility with StructureWindowControlApplet</tt> </tt>
<a name="L108"></a><tt class="py-lineno">108</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">chgcar</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L109"></a><tt class="py-lineno">109</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">index</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L110"></a><tt class="py-lineno">110</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sequencetype</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-60" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.INITIAL_SEQUENCE
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.INITIAL_SEQUENCE" class="py-name" href="#" onclick="return doclink('link-60', 'INITIAL_SEQUENCE', 'link-33');">INITIAL_SEQUENCE</a></tt> </tt>
<a name="L111"></a><tt class="py-lineno">111</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">arrowstype</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L112"></a><tt class="py-lineno">112</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">cell_centering</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
</div><a name="L113"></a><tt class="py-lineno">113</tt>  <tt class="py-line"> </tt>
<a name="L114"></a><tt class="py-lineno">114</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.initUI"></a><div id="STMWindowApplet.initUI-def"><a name="L115"></a><tt class="py-lineno">115</tt> <a class="py-toggle" href="#" id="STMWindowApplet.initUI-toggle" onclick="return toggle('STMWindowApplet.initUI');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#initUI">initUI</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.initUI-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.initUI-expanded"><a name="L116"></a><tt class="py-lineno">116</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-61" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.showStructureWindow()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#showStructureWindow,Method p4vasp.applet.StructureApplet.StructureApplet.showStructureWindow()=p4vasp.applet.StructureApplet.StructureApplet-class.html#showStructureWindow,Method p4vasp.applet.StructureWindowApplet.StructureWindowApplet.showStructureWindow()=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#showStructureWindow"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.showStructureWindow
p4vasp.applet.StructureApplet.StructureApplet.showStructureWindow
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.showStructureWindow" class="py-name" href="#" onclick="return doclink('link-61', 'showStructureWindow', 'link-61');">showStructureWindow</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L117"></a><tt class="py-lineno">117</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.setExternalMode"></a><div id="STMWindowApplet.setExternalMode-def"><a name="L118"></a><tt class="py-lineno">118</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setExternalMode-toggle" onclick="return toggle('STMWindowApplet.setExternalMode');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setExternalMode">setExternalMode</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setExternalMode-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setExternalMode-expanded"><a name="L119"></a><tt class="py-lineno">119</tt>  <tt class="py-line">        <tt class="py-keyword">pass</tt> </tt>
</div><a name="STMWindowApplet.setEmbeddedMode"></a><div id="STMWindowApplet.setEmbeddedMode-def"><a name="L120"></a><tt class="py-lineno">120</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setEmbeddedMode-toggle" onclick="return toggle('STMWindowApplet.setEmbeddedMode');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setEmbeddedMode">setEmbeddedMode</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setEmbeddedMode-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setEmbeddedMode-expanded"><a name="L121"></a><tt class="py-lineno">121</tt>  <tt class="py-line"><tt class="py-comment">#    msg().error("StructureWindowApplet.setEmbeddedMode() not supported.")</tt> </tt>
<a name="L122"></a><tt class="py-lineno">122</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-string">"STMWindowApplet.setEmbeddedMode() not supported."</tt> </tt>
</div><a name="L123"></a><tt class="py-lineno">123</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.createPanel"></a><div id="STMWindowApplet.createPanel-def"><a name="L124"></a><tt class="py-lineno">124</tt> <a class="py-toggle" href="#" id="STMWindowApplet.createPanel-toggle" onclick="return toggle('STMWindowApplet.createPanel');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#createPanel">createPanel</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.createPanel-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.createPanel-expanded"><a name="L125"></a><tt class="py-lineno">125</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
</div><a name="STMWindowApplet.setSystem"></a><div id="STMWindowApplet.setSystem-def"><a name="L126"></a><tt class="py-lineno">126</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setSystem-toggle" onclick="return toggle('STMWindowApplet.setSystem');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setSystem">setSystem</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">x</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setSystem-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setSystem-expanded"><a name="L127"></a><tt class="py-lineno">127</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-62" class="py-name" targets="Variable p4vasp.applet.Applet.Applet.pin_status=p4vasp.applet.Applet.Applet-class.html#pin_status"><a title="p4vasp.applet.Applet.Applet.pin_status" class="py-name" href="#" onclick="return doclink('link-62', 'pin_status', 'link-62');">pin_status</a></tt><tt class="py-op">:</tt> </tt>
<a name="L128"></a><tt class="py-lineno">128</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">system</tt><tt class="py-op">=</tt><tt class="py-name">x</tt> </tt>
<a name="L129"></a><tt class="py-lineno">129</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-63" class="py-name" targets="Method p4vasp.applet.Applet.Applet.updateSystem()=p4vasp.applet.Applet.Applet-class.html#updateSystem,Method p4vasp.applet.Applet.GraphApplet.updateSystem()=p4vasp.applet.Applet.GraphApplet-class.html#updateSystem,Method p4vasp.applet.Applet.TextApplet.updateSystem()=p4vasp.applet.Applet.TextApplet-class.html#updateSystem,Method p4vasp.applet.BuilderApplet.BuilderApplet.updateSystem()=p4vasp.applet.BuilderApplet.BuilderApplet-class.html#updateSystem,Method p4vasp.applet.CommitApplet.CommitApplet.updateSystem()=p4vasp.applet.CommitApplet.CommitApplet-class.html#updateSystem,Method p4vasp.applet.DBApplet.DBApplet.updateSystem()=p4vasp.applet.DBApplet.DBApplet-class.html#updateSystem,Method p4vasp.applet.DielectricApplet.DielectricApplet.updateSystem()=p4vasp.applet.DielectricApplet.DielectricApplet-class.html#updateSystem,Method p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet.updateSystem()=p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet-class.html#updateSystem,Method p4vasp.applet.ElectronicApplet.ElectronicApplet.updateSystem()=p4vasp.applet.ElectronicApplet.ElectronicApplet-class.html#updateSystem,Method p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet.updateSystem()=p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet-class.html#updateSystem,Method p4vasp.applet.ExportApplet.ExportApplet.updateSystem()=p4vasp.applet.ExportApplet.ExportApplet-class.html#updateSystem,Method p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet.updateSystem()=p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet-class.html#updateSystem,Method p4vasp.applet.GraphWindowApplet.GraphWindowApplet.updateSystem()=p4vasp.applet.GraphWindowApplet.GraphWindowApplet-class.html#updateSystem,Method p4vasp.applet.InfoApplet.InfoApplet.updateSystem()=p4vasp.applet.InfoApplet.InfoApplet-class.html#updateSystem,Method p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet.updateSystem()=p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet-class.html#updateSystem,Method p4vasp.applet.LatticeApplet.LatticeApplet.updateSystem()=p4vasp.applet.LatticeApplet.LatticeApplet-class.html#updateSystem,Method p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet.updateSystem()=p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet-class.html#updateSystem,Method p4vasp.applet.MeasureApplet.MeasureApplet.updateSystem()=p4vasp.applet.MeasureApplet.MeasureApplet-class.html#updateSystem,Method p4vasp.applet.MoveApplet.MoveApplet.updateSystem()=p4vasp.applet.MoveApplet.MoveApplet-class.html#updateSystem,Method p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet.updateSystem()=p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet-class.html#updateSystem,Method p4vasp.applet.NewApplet.NewApplet.updateSystem()=p4vasp.applet.NewApplet.NewApplet-class.html#updateSystem,Method p4vasp.applet.RotateApplet.RotateApplet.updateSystem()=p4vasp.applet.RotateApplet.RotateApplet-class.html#updateSystem,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.updateSystem()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateSystem,Method p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.updateSystem()=p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet-class.html#updateSystem,Method p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet.updateSystem()=p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet-class.html#updateSystem,Method p4vasp.applet.StructureApplet.StructureApplet.updateSystem()=p4vasp.applet.StructureApplet.StructureApplet-class.html#updateSystem,Method p4vasp.applet.StructureWindowApplet.StructureWindowApplet.updateSystem()=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#updateSystem,Method p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.updateSystem()=p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet-class.html#updateSystem,Method p4vasp.applet.VACApplet.VACApplet.updateSystem()=p4vasp.applet.VACApplet.VACApplet-class.html#updateSystem"><a title="p4vasp.applet.Applet.Applet.updateSystem
p4vasp.applet.Applet.GraphApplet.updateSystem
p4vasp.applet.Applet.TextApplet.updateSystem
p4vasp.applet.BuilderApplet.BuilderApplet.updateSystem
p4vasp.applet.CommitApplet.CommitApplet.updateSystem
p4vasp.applet.DBApplet.DBApplet.updateSystem
p4vasp.applet.DielectricApplet.DielectricApplet.updateSystem
p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet.updateSystem
p4vasp.applet.ElectronicApplet.ElectronicApplet.updateSystem
p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet.updateSystem
p4vasp.applet.ExportApplet.ExportApplet.updateSystem
p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet.updateSystem
p4vasp.applet.GraphWindowApplet.GraphWindowApplet.updateSystem
p4vasp.applet.InfoApplet.InfoApplet.updateSystem
p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet.updateSystem
p4vasp.applet.LatticeApplet.LatticeApplet.updateSystem
p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet.updateSystem
p4vasp.applet.MeasureApplet.MeasureApplet.updateSystem
p4vasp.applet.MoveApplet.MoveApplet.updateSystem
p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet.updateSystem
p4vasp.applet.NewApplet.NewApplet.updateSystem
p4vasp.applet.RotateApplet.RotateApplet.updateSystem
p4vasp.applet.STMWindowApplet.STMWindowApplet.updateSystem
p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.updateSystem
p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet.updateSystem
p4vasp.applet.StructureApplet.StructureApplet.updateSystem
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.updateSystem
p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.updateSystem
p4vasp.applet.VACApplet.VACApplet.updateSystem" class="py-name" href="#" onclick="return doclink('link-63', 'updateSystem', 'link-63');">updateSystem</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L130"></a><tt class="py-lineno">130</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.updateSystem"></a><div id="STMWindowApplet.updateSystem-def"><a name="L131"></a><tt class="py-lineno">131</tt> <a class="py-toggle" href="#" id="STMWindowApplet.updateSystem-toggle" onclick="return toggle('STMWindowApplet.updateSystem');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateSystem">updateSystem</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">x</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.updateSystem-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.updateSystem-expanded"><a name="L132"></a><tt class="py-lineno">132</tt>  <tt class="py-line">        <tt id="link-64" class="py-name" targets="Method p4vasp.Property.FilterPropertyManager.schedule()=p4vasp.Property.FilterPropertyManager-class.html#schedule,Method p4vasp.Property.Property.schedule()=p4vasp.Property.Property-class.html#schedule,Method p4vasp.Property.PropertyManager.schedule()=p4vasp.Property.PropertyManager-class.html#schedule,Function p4vasp.schedule()=p4vasp-module.html#schedule,Method p4vasp.schedule'.Scheduler.schedule()=p4vasp.schedule%27.Scheduler-class.html#schedule"><a title="p4vasp.Property.FilterPropertyManager.schedule
p4vasp.Property.Property.schedule
p4vasp.Property.PropertyManager.schedule
p4vasp.schedule
p4vasp.schedule'.Scheduler.schedule" class="py-name" href="#" onclick="return doclink('link-64', 'schedule', 'link-64');">schedule</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-65" class="py-name" targets="Method p4vasp.applet.DielectricApplet.DielectricApplet.updateSystemGen()=p4vasp.applet.DielectricApplet.DielectricApplet-class.html#updateSystemGen,Method p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet.updateSystemGen()=p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet-class.html#updateSystemGen,Method p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet.updateSystemGen()=p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet-class.html#updateSystemGen,Method p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet.updateSystemGen()=p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet-class.html#updateSystemGen,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.updateSystemGen()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateSystemGen,Method p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet.updateSystemGen()=p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet-class.html#updateSystemGen"><a title="p4vasp.applet.DielectricApplet.DielectricApplet.updateSystemGen
p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet.updateSystemGen
p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet.updateSystemGen
p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet.updateSystemGen
p4vasp.applet.STMWindowApplet.STMWindowApplet.updateSystemGen
p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet.updateSystemGen" class="py-name" href="#" onclick="return doclink('link-65', 'updateSystemGen', 'link-65');">updateSystemGen</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L133"></a><tt class="py-lineno">133</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.updateSystemGen"></a><div id="STMWindowApplet.updateSystemGen-def"><a name="L134"></a><tt class="py-lineno">134</tt> <a class="py-toggle" href="#" id="STMWindowApplet.updateSystemGen-toggle" onclick="return toggle('STMWindowApplet.updateSystemGen');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateSystemGen">updateSystemGen</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">x</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.updateSystemGen-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.updateSystemGen-expanded"><a name="L135"></a><tt class="py-lineno">135</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-66" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.showStructureWindow
p4vasp.applet.StructureApplet.StructureApplet.showStructureWindow
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.showStructureWindow" class="py-name" href="#" onclick="return doclink('link-66', 'showStructureWindow', 'link-61');">showStructureWindow</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L136"></a><tt class="py-lineno">136</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">system</tt><tt class="py-op">.</tt><tt id="link-67" class="py-name" targets="Method p4vasp.Property.FilterPropertyManager.scheduleFirst()=p4vasp.Property.FilterPropertyManager-class.html#scheduleFirst,Method p4vasp.Property.Property.scheduleFirst()=p4vasp.Property.Property-class.html#scheduleFirst,Method p4vasp.Property.PropertyManager.scheduleFirst()=p4vasp.Property.PropertyManager-class.html#scheduleFirst,Method p4vasp.schedule'.Scheduler.scheduleFirst()=p4vasp.schedule%27.Scheduler-class.html#scheduleFirst,Function p4vasp.scheduleFirst()=p4vasp-module.html#scheduleFirst"><a title="p4vasp.Property.FilterPropertyManager.scheduleFirst
p4vasp.Property.Property.scheduleFirst
p4vasp.Property.PropertyManager.scheduleFirst
p4vasp.schedule'.Scheduler.scheduleFirst
p4vasp.scheduleFirst" class="py-name" href="#" onclick="return doclink('link-67', 'scheduleFirst', 'link-67');">scheduleFirst</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">chgname</tt><tt class="py-op">)</tt> </tt>
<a name="L137"></a><tt class="py-lineno">137</tt>  <tt class="py-line">        <tt class="py-keyword">yield</tt> <tt class="py-number">1</tt> </tt>
<a name="L138"></a><tt class="py-lineno">138</tt>  <tt class="py-line">        <tt id="link-68" class="py-name" targets="Variable p4vasp.SystemPM.c=p4vasp.SystemPM-module.html#c"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-68', 'c', 'link-68');">c</a></tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">system</tt><tt class="py-op">[</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">chgname</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-69" class="py-name" targets="Method p4vasp.ODPdom.AttributeList.get()=p4vasp.ODPdom.AttributeList-class.html#get,Method p4vasp.ODPdom.NamedNodeMap.get()=p4vasp.ODPdom.NamedNodeMap-class.html#get,Method p4vasp.Property.Property.get()=p4vasp.Property.Property-class.html#get,Method p4vasp.cStructure.Structure.get()=p4vasp.cStructure.Structure-class.html#get,Method p4vasp.cmatrix.Matrix.get()=p4vasp.cmatrix.Matrix-class.html#get,Method p4vasp.cmatrix.Vector.get()=p4vasp.cmatrix.Vector-class.html#get,Method p4vasp.db.Query.get()=p4vasp.db.Query-class.html#get,Method p4vasp.matrix.Matrix.get()=p4vasp.matrix.Matrix-class.html#get,Method p4vasp.matrix.Vector.get()=p4vasp.matrix.Vector-class.html#get,Method p4vasp.paint3d.Paint3DInterface.Paint3DRecorder.get()=p4vasp.paint3d.Paint3DInterface.Paint3DRecorder-class.html#get"><a title="p4vasp.ODPdom.AttributeList.get
p4vasp.ODPdom.NamedNodeMap.get
p4vasp.Property.Property.get
p4vasp.cStructure.Structure.get
p4vasp.cmatrix.Matrix.get
p4vasp.cmatrix.Vector.get
p4vasp.db.Query.get
p4vasp.matrix.Matrix.get
p4vasp.matrix.Vector.get
p4vasp.paint3d.Paint3DInterface.Paint3DRecorder.get" class="py-name" href="#" onclick="return doclink('link-69', 'get', 'link-69');">get</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L139"></a><tt class="py-lineno">139</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-70" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-70', 'c', 'link-68');">c</a></tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L140"></a><tt class="py-lineno">140</tt>  <tt class="py-line">            <tt id="link-71" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-71', 'c', 'link-68');">c</a></tt><tt class="py-op">=</tt><tt id="link-72" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-72', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt id="link-73" class="py-name" targets="Method p4vasp.Selection.Selection.clone()=p4vasp.Selection.Selection-class.html#clone,Method p4vasp.applet.Applet.Applet.clone()=p4vasp.applet.Applet.Applet-class.html#clone,Method p4vasp.applet.Applet.GraphApplet.clone()=p4vasp.applet.Applet.GraphApplet-class.html#clone,Method p4vasp.applet.ElectronicApplet.Line.clone()=p4vasp.applet.ElectronicApplet.Line-class.html#clone,Method p4vasp.applet.GraphWindowApplet.GraphWindowApplet.clone()=p4vasp.applet.GraphWindowApplet.GraphWindowApplet-class.html#clone,Method p4vasp.cStructure.AtomtypesRecord.clone()=p4vasp.cStructure.AtomtypesRecord-class.html#clone,Method p4vasp.cStructure.Structure.clone()=p4vasp.cStructure.Structure-class.html#clone,Method p4vasp.cmatrix.Matrix.clone()=p4vasp.cmatrix.Matrix-class.html#clone,Method p4vasp.cmatrix.Vector.clone()=p4vasp.cmatrix.Vector-class.html#clone,Method p4vasp.graph.Axis.clone()=p4vasp.graph.Axis-class.html#clone,Method p4vasp.graph.Cloneable.clone()=p4vasp.graph.Cloneable-class.html#clone,Method p4vasp.graph.Graph.clone()=p4vasp.graph.Graph-class.html#clone,Method p4vasp.graph.Set.clone()=p4vasp.graph.Set-class.html#clone,Method p4vasp.graph.World.clone()=p4vasp.graph.World-class.html#clone,Method p4vasp.matrix.Matrix.clone()=p4vasp.matrix.Matrix-class.html#clone,Method p4vasp.matrix.Vector.clone()=p4vasp.matrix.Vector-class.html#clone,Method p4vasp.paint3d.data.AmbientLight.clone()=p4vasp.paint3d.data.AmbientLight-class.html#clone,Method p4vasp.paint3d.data.Arrow.clone()=p4vasp.paint3d.data.Arrow-class.html#clone,Method p4vasp.paint3d.data.Background.clone()=p4vasp.paint3d.data.Background-class.html#clone,Method p4vasp.paint3d.data.ColorMaterial.clone()=p4vasp.paint3d.data.ColorMaterial-class.html#clone,Method p4vasp.paint3d.data.Cone.clone()=p4vasp.paint3d.data.Cone-class.html#clone,Method p4vasp.paint3d.data.Cylinder.clone()=p4vasp.paint3d.data.Cylinder-class.html#clone,Method p4vasp.paint3d.data.Frame.clone()=p4vasp.paint3d.data.Frame-class.html#clone,Method p4vasp.paint3d.data.Line.clone()=p4vasp.paint3d.data.Line-class.html#clone,Method p4vasp.paint3d.data.Mesh.clone()=p4vasp.paint3d.data.Mesh-class.html#clone,Method p4vasp.paint3d.data.OrthographicCamera.clone()=p4vasp.paint3d.data.OrthographicCamera-class.html#clone,Method p4vasp.paint3d.data.PerspectiveCamera.clone()=p4vasp.paint3d.data.PerspectiveCamera-class.html#clone,Method p4vasp.paint3d.data.PointLight.clone()=p4vasp.paint3d.data.PointLight-class.html#clone,Method p4vasp.paint3d.data.Sphere.clone()=p4vasp.paint3d.data.Sphere-class.html#clone"><a title="p4vasp.Selection.Selection.clone
p4vasp.applet.Applet.Applet.clone
p4vasp.applet.Applet.GraphApplet.clone
p4vasp.applet.ElectronicApplet.Line.clone
p4vasp.applet.GraphWindowApplet.GraphWindowApplet.clone
p4vasp.cStructure.AtomtypesRecord.clone
p4vasp.cStructure.Structure.clone
p4vasp.cmatrix.Matrix.clone
p4vasp.cmatrix.Vector.clone
p4vasp.graph.Axis.clone
p4vasp.graph.Cloneable.clone
p4vasp.graph.Graph.clone
p4vasp.graph.Set.clone
p4vasp.graph.World.clone
p4vasp.matrix.Matrix.clone
p4vasp.matrix.Vector.clone
p4vasp.paint3d.data.AmbientLight.clone
p4vasp.paint3d.data.Arrow.clone
p4vasp.paint3d.data.Background.clone
p4vasp.paint3d.data.ColorMaterial.clone
p4vasp.paint3d.data.Cone.clone
p4vasp.paint3d.data.Cylinder.clone
p4vasp.paint3d.data.Frame.clone
p4vasp.paint3d.data.Line.clone
p4vasp.paint3d.data.Mesh.clone
p4vasp.paint3d.data.OrthographicCamera.clone
p4vasp.paint3d.data.PerspectiveCamera.clone
p4vasp.paint3d.data.PointLight.clone
p4vasp.paint3d.data.Sphere.clone" class="py-name" href="#" onclick="return doclink('link-73', 'clone', 'link-73');">clone</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L141"></a><tt class="py-lineno">141</tt>  <tt class="py-line">        <tt class="py-keyword">yield</tt> <tt class="py-number">1</tt> </tt>
<a name="L142"></a><tt class="py-lineno">142</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt><tt class="py-op">=</tt><tt id="link-74" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-74', 'c', 'link-68');">c</a></tt> </tt>
<a name="L143"></a><tt class="py-lineno">143</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L144"></a><tt class="py-lineno">144</tt>  <tt class="py-line"> </tt>
<a name="L145"></a><tt class="py-lineno">145</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-75" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-75', 'c', 'link-68');">c</a></tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L146"></a><tt class="py-lineno">146</tt>  <tt class="py-line">            <tt class="py-name">s</tt><tt class="py-op">=</tt><tt id="link-76" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-76', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-77" class="py-name"><a title="p4vasp.cStructure" class="py-name" href="#" onclick="return doclink('link-77', 'cStructure', 'link-17');">cStructure</a></tt><tt class="py-op">.</tt><tt id="link-78" class="py-name"><a title="p4vasp.Structure
p4vasp.Structure.Structure
p4vasp.cStructure.Structure" class="py-name" href="#" onclick="return doclink('link-78', 'Structure', 'link-15');">Structure</a></tt><tt class="py-op">(</tt><tt class="py-name">pointer</tt><tt class="py-op">=</tt><tt id="link-79" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-79', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">)</tt> </tt>
<a name="L147"></a><tt class="py-lineno">147</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">=</tt><tt class="py-name">s</tt> </tt>
<a name="L148"></a><tt class="py-lineno">148</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L149"></a><tt class="py-lineno">149</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L150"></a><tt class="py-lineno">150</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-80" class="py-name" targets="Method p4vasp.Structure.Structure.setStructure()=p4vasp.Structure.Structure-class.html#setStructure,Method p4vasp.StructureWindow.StructureWindow.setStructure()=p4vasp.StructureWindow.StructureWindow-class.html#setStructure,Method p4vasp.applet.BuilderApplet.StructureTreeModel.setStructure()=p4vasp.applet.BuilderApplet.StructureTreeModel-class.html#setStructure,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.setStructure()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setStructure,Method p4vasp.applet.StructureApplet.StructureApplet.setStructure()=p4vasp.applet.StructureApplet.StructureApplet-class.html#setStructure,Method p4vasp.applet.StructureWindowApplet.StructureWindowApplet.setStructure()=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#setStructure,Method p4vasp.cStructure.Structure.setStructure()=p4vasp.cStructure.Structure-class.html#setStructure"><a title="p4vasp.Structure.Structure.setStructure
p4vasp.StructureWindow.StructureWindow.setStructure
p4vasp.applet.BuilderApplet.StructureTreeModel.setStructure
p4vasp.applet.STMWindowApplet.STMWindowApplet.setStructure
p4vasp.applet.StructureApplet.StructureApplet.setStructure
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.setStructure
p4vasp.cStructure.Structure.setStructure" class="py-name" href="#" onclick="return doclink('link-80', 'setStructure', 'link-80');">setStructure</a></tt><tt class="py-op">(</tt><tt class="py-name">None</tt><tt class="py-op">)</tt> </tt>
<a name="L151"></a><tt class="py-lineno">151</tt>  <tt class="py-line"> </tt>
<a name="L152"></a><tt class="py-lineno">152</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-81" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.updatePlane()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updatePlane"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.updatePlane" class="py-name" href="#" onclick="return doclink('link-81', 'updatePlane', 'link-81');">updatePlane</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L153"></a><tt class="py-lineno">153</tt>  <tt class="py-line">        <tt class="py-name">ctl</tt><tt class="py-op">=</tt><tt id="link-82" class="py-name" targets="Function p4vasp.applet.applets()=p4vasp.applet-module.html#applets"><a title="p4vasp.applet.applets" class="py-name" href="#" onclick="return doclink('link-82', 'applets', 'link-82');">applets</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-83" class="py-name" targets="Method p4vasp.applet.AppletRepository.getActive()=p4vasp.applet.AppletRepository-class.html#getActive,Method p4vasp.repository.Repository.getActive()=p4vasp.repository.Repository-class.html#getActive"><a title="p4vasp.applet.AppletRepository.getActive
p4vasp.repository.Repository.getActive" class="py-name" href="#" onclick="return doclink('link-83', 'getActive', 'link-83');">getActive</a></tt><tt class="py-op">(</tt><tt id="link-84" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-84', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-85" class="py-name"><a title="p4vasp.applet" class="py-name" href="#" onclick="return doclink('link-85', 'applet', 'link-5');">applet</a></tt><tt class="py-op">.</tt><tt id="link-86" class="py-name" targets="Module p4vasp.applet.STMWindowControlApplet=p4vasp.applet.STMWindowControlApplet-module.html,Class p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet=p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet-class.html"><a title="p4vasp.applet.STMWindowControlApplet
p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet" class="py-name" href="#" onclick="return doclink('link-86', 'STMWindowControlApplet', 'link-86');">STMWindowControlApplet</a></tt><tt class="py-op">.</tt><tt id="link-87" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet
p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet" class="py-name" href="#" onclick="return doclink('link-87', 'STMWindowControlApplet', 'link-86');">STMWindowControlApplet</a></tt><tt class="py-op">)</tt> </tt>
<a name="L154"></a><tt class="py-lineno">154</tt>  <tt class="py-line">        <tt class="py-name">ctl</tt><tt class="py-op">.</tt><tt id="link-88" class="py-name" targets="Method p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet.applet_activated()=p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet-class.html#applet_activated,Method p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.applet_activated()=p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet-class.html#applet_activated,Method p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.applet_activated()=p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet-class.html#applet_activated"><a title="p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet.applet_activated
p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.applet_activated
p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.applet_activated" class="py-name" href="#" onclick="return doclink('link-88', 'applet_activated', 'link-88');">applet_activated</a></tt><tt class="py-op">(</tt><tt class="py-name">None</tt><tt class="py-op">,</tt><tt class="py-name">self</tt><tt class="py-op">)</tt> </tt>
</div><a name="L155"></a><tt class="py-lineno">155</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.initDir"></a><div id="STMWindowApplet.initDir-def"><a name="L156"></a><tt class="py-lineno">156</tt> <a class="py-toggle" href="#" id="STMWindowApplet.initDir-toggle" onclick="return toggle('STMWindowApplet.initDir');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#initDir">initDir</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">s</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.initDir-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.initDir-expanded"><a name="L157"></a><tt class="py-lineno">157</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">s</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L158"></a><tt class="py-lineno">158</tt>  <tt class="py-line">            <tt id="link-89" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-89', 'c', 'link-68');">c</a></tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-90" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.getCharge()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getCharge"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.getCharge" class="py-name" href="#" onclick="return doclink('link-90', 'getCharge', 'link-90');">getCharge</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L159"></a><tt class="py-lineno">159</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt id="link-91" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-91', 'c', 'link-68');">c</a></tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L160"></a><tt class="py-lineno">160</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
<a name="L161"></a><tt class="py-lineno">161</tt>  <tt class="py-line">            <tt class="py-name">s</tt><tt class="py-op">=</tt><tt id="link-92" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-92', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-93" class="py-name"><a title="p4vasp.cStructure" class="py-name" href="#" onclick="return doclink('link-93', 'cStructure', 'link-17');">cStructure</a></tt><tt class="py-op">.</tt><tt id="link-94" class="py-name"><a title="p4vasp.Structure
p4vasp.Structure.Structure
p4vasp.cStructure.Structure" class="py-name" href="#" onclick="return doclink('link-94', 'Structure', 'link-15');">Structure</a></tt><tt class="py-op">(</tt><tt class="py-name">pointer</tt><tt class="py-op">=</tt><tt id="link-95" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-95', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">)</tt> </tt>
<a name="L162"></a><tt class="py-lineno">162</tt>  <tt class="py-line"> </tt>
<a name="L163"></a><tt class="py-lineno">163</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L164"></a><tt class="py-lineno">164</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b1</tt><tt class="py-op">=</tt><tt id="link-96" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-96', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-97" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-97', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L165"></a><tt class="py-lineno">165</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b2</tt><tt class="py-op">=</tt><tt id="link-98" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-98', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-99" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-99', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L166"></a><tt class="py-lineno">166</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bz</tt><tt class="py-op">=</tt><tt id="link-100" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-100', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-101" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-101', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L167"></a><tt class="py-lineno">167</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L168"></a><tt class="py-lineno">168</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b1</tt><tt class="py-op">=</tt><tt id="link-102" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-102', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-103" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-103', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L169"></a><tt class="py-lineno">169</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b2</tt><tt class="py-op">=</tt><tt id="link-104" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-104', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-105" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-105', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L170"></a><tt class="py-lineno">170</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bz</tt><tt class="py-op">=</tt><tt id="link-106" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-106', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-107" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-107', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L171"></a><tt class="py-lineno">171</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L172"></a><tt class="py-lineno">172</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b1</tt><tt class="py-op">=</tt><tt id="link-108" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-108', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-109" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-109', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L173"></a><tt class="py-lineno">173</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b2</tt><tt class="py-op">=</tt><tt id="link-110" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-110', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-111" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-111', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L174"></a><tt class="py-lineno">174</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bz</tt><tt class="py-op">=</tt><tt id="link-112" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-112', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-113" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-113', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L175"></a><tt class="py-lineno">175</tt>  <tt class="py-line"><tt class="py-comment">#    print "initDir b1",b1</tt> </tt>
<a name="L176"></a><tt class="py-lineno">176</tt>  <tt class="py-line"><tt class="py-comment">#    print "initDir b2",b2</tt> </tt>
<a name="L177"></a><tt class="py-lineno">177</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-114" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-114', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">setB1</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b1</tt><tt class="py-op">.</tt><tt class="py-name">pointer</tt><tt class="py-op">)</tt> </tt>
<a name="L178"></a><tt class="py-lineno">178</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-115" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-115', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">setB2</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b2</tt><tt class="py-op">.</tt><tt class="py-name">pointer</tt><tt class="py-op">)</tt> </tt>
</div><a name="L179"></a><tt class="py-lineno">179</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.setN"></a><div id="STMWindowApplet.setN-def"><a name="L180"></a><tt class="py-lineno">180</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setN-toggle" onclick="return toggle('STMWindowApplet.setN');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setN">setN</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">n</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setN-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setN-expanded"><a name="L181"></a><tt class="py-lineno">181</tt>  <tt class="py-line">        <tt class="py-name">nn</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-116" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.getMaxN()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getMaxN"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.getMaxN" class="py-name" href="#" onclick="return doclink('link-116', 'getMaxN', 'link-116');">getMaxN</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L182"></a><tt class="py-lineno">182</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt id="link-117" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-117', 'n', 'link-50');">n</a></tt><tt class="py-op">)</tt><tt class="py-op">==</tt><tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-string">""</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L183"></a><tt class="py-lineno">183</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L184"></a><tt class="py-lineno">184</tt>  <tt class="py-line">                <tt id="link-118" class="py-name" targets="Function p4vasp.msg()=p4vasp-module.html#msg"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-118', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-119" class="py-name" targets="Method p4vasp.message.MessageDriver.error()=p4vasp.message.MessageDriver-class.html#error,Method p4vasp.schedule'.Process.error()=p4vasp.schedule%27.Process-class.html#error"><a title="p4vasp.message.MessageDriver.error
p4vasp.schedule'.Process.error" class="py-name" href="#" onclick="return doclink('link-119', 'error', 'link-119');">error</a></tt><tt class="py-op">(</tt><tt class="py-string">"Charge not available in STM applet."</tt><tt class="py-op">)</tt> </tt>
<a name="L185"></a><tt class="py-lineno">185</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
<a name="L186"></a><tt class="py-lineno">186</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L187"></a><tt class="py-lineno">187</tt>  <tt class="py-line">                <tt id="link-120" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-120', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-121" class="py-name"><a title="p4vasp.message.MessageDriver.error
p4vasp.schedule'.Process.error" class="py-name" href="#" onclick="return doclink('link-121', 'error', 'link-119');">error</a></tt><tt class="py-op">(</tt><tt class="py-string">"Structure not available in STM applet."</tt><tt class="py-op">)</tt> </tt>
<a name="L188"></a><tt class="py-lineno">188</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
<a name="L189"></a><tt class="py-lineno">189</tt>  <tt class="py-line">            <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L190"></a><tt class="py-lineno">190</tt>  <tt class="py-line">                <tt class="py-name">txt</tt><tt class="py-op">=</tt><tt class="py-name">strip</tt><tt class="py-op">(</tt><tt id="link-122" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-122', 'n', 'link-50');">n</a></tt><tt class="py-op">)</tt> </tt>
<a name="L191"></a><tt class="py-lineno">191</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">txt</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">==</tt><tt class="py-string">"#"</tt><tt class="py-op">:</tt> </tt>
<a name="L192"></a><tt class="py-lineno">192</tt>  <tt class="py-line">                    <tt id="link-123" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-123', 'n', 'link-50');">n</a></tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">eval</tt><tt class="py-op">(</tt><tt class="py-name">txt</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L193"></a><tt class="py-lineno">193</tt>  <tt class="py-line">                <tt class="py-keyword">elif</tt> <tt class="py-name">txt</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">==</tt><tt class="py-string">"%"</tt><tt class="py-op">:</tt> </tt>
<a name="L194"></a><tt class="py-lineno">194</tt>  <tt class="py-line">                    <tt class="py-name">f</tt><tt class="py-op">=</tt><tt id="link-124" class="py-name" targets="Class float=float-class.html"><a title="float" class="py-name" href="#" onclick="return doclink('link-124', 'float', 'link-124');">float</a></tt><tt class="py-op">(</tt><tt class="py-name">eval</tt><tt class="py-op">(</tt><tt class="py-name">txt</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-number">0.01</tt> </tt>
<a name="L195"></a><tt class="py-lineno">195</tt>  <tt class="py-line">                    <tt id="link-125" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-125', 'n', 'link-50');">n</a></tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-number">100</tt><tt class="py-op">*</tt><tt class="py-name">nn</tt><tt class="py-op">+</tt><tt class="py-name">f</tt><tt class="py-op">*</tt><tt class="py-name">nn</tt><tt class="py-op">)</tt><tt class="py-op">%</tt><tt class="py-name">nn</tt> </tt>
<a name="L196"></a><tt class="py-lineno">196</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L197"></a><tt class="py-lineno">197</tt>  <tt class="py-line">                    <tt class="py-name">zz</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-126" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.getMaxPos()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getMaxPos"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.getMaxPos" class="py-name" href="#" onclick="return doclink('link-126', 'getMaxPos', 'link-126');">getMaxPos</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L198"></a><tt class="py-lineno">198</tt>  <tt class="py-line">                    <tt class="py-name">f</tt><tt class="py-op">=</tt><tt id="link-127" class="py-name"><a title="float" class="py-name" href="#" onclick="return doclink('link-127', 'float', 'link-124');">float</a></tt><tt class="py-op">(</tt><tt class="py-name">eval</tt><tt class="py-op">(</tt><tt class="py-name">txt</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">/</tt><tt class="py-name">zz</tt> </tt>
<a name="L199"></a><tt class="py-lineno">199</tt>  <tt class="py-line">                    <tt id="link-128" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-128', 'n', 'link-50');">n</a></tt><tt class="py-op">=</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-number">100</tt><tt class="py-op">*</tt><tt class="py-name">nn</tt><tt class="py-op">+</tt><tt class="py-name">f</tt><tt class="py-op">*</tt><tt class="py-name">nn</tt><tt class="py-op">)</tt><tt class="py-op">%</tt><tt class="py-name">nn</tt> </tt>
<a name="L200"></a><tt class="py-lineno">200</tt>  <tt class="py-line">            <tt class="py-keyword">except</tt><tt class="py-op">:</tt> </tt>
<a name="L201"></a><tt class="py-lineno">201</tt>  <tt class="py-line">                <tt id="link-129" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-129', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-130" class="py-name"><a title="p4vasp.message.MessageDriver.error
p4vasp.schedule'.Process.error" class="py-name" href="#" onclick="return doclink('link-130', 'error', 'link-119');">error</a></tt><tt class="py-op">(</tt><tt class="py-string">"Format error for STM tip position."</tt><tt class="py-op">)</tt> </tt>
<a name="L202"></a><tt class="py-lineno">202</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-131" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-131', 'n', 'link-50');">n</a></tt><tt class="py-op">=</tt><tt class="py-name">min</tt><tt class="py-op">(</tt><tt class="py-name">max</tt><tt class="py-op">(</tt><tt id="link-132" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-132', 'n', 'link-50');">n</a></tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">nn</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
</div><a name="L203"></a><tt class="py-lineno">203</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.getMaxN"></a><div id="STMWindowApplet.getMaxN-def"><a name="L204"></a><tt class="py-lineno">204</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getMaxN-toggle" onclick="return toggle('STMWindowApplet.getMaxN');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getMaxN">getMaxN</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getMaxN-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getMaxN-expanded"><a name="L205"></a><tt class="py-lineno">205</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L206"></a><tt class="py-lineno">206</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-number">0</tt> </tt>
<a name="L207"></a><tt class="py-lineno">207</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L208"></a><tt class="py-lineno">208</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt><tt class="py-op">.</tt><tt class="py-name">nx</tt> </tt>
<a name="L209"></a><tt class="py-lineno">209</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L210"></a><tt class="py-lineno">210</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt><tt class="py-op">.</tt><tt class="py-name">ny</tt> </tt>
<a name="L211"></a><tt class="py-lineno">211</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L212"></a><tt class="py-lineno">212</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt><tt class="py-op">.</tt><tt class="py-name">nz</tt> </tt>
</div><a name="L213"></a><tt class="py-lineno">213</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.getMaxPos"></a><div id="STMWindowApplet.getMaxPos-def"><a name="L214"></a><tt class="py-lineno">214</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getMaxPos-toggle" onclick="return toggle('STMWindowApplet.getMaxPos');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getMaxPos">getMaxPos</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getMaxPos-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getMaxPos-expanded"><a name="L215"></a><tt class="py-lineno">215</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L216"></a><tt class="py-lineno">216</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-number">0</tt> </tt>
<a name="L217"></a><tt class="py-lineno">217</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L218"></a><tt class="py-lineno">218</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-133" class="py-name" targets="Method p4vasp.cmatrix.Vector.length()=p4vasp.cmatrix.Vector-class.html#length,Method p4vasp.matrix.Vector.length()=p4vasp.matrix.Vector-class.html#length"><a title="p4vasp.cmatrix.Vector.length
p4vasp.matrix.Vector.length" class="py-name" href="#" onclick="return doclink('link-133', 'length', 'link-133');">length</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L219"></a><tt class="py-lineno">219</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L220"></a><tt class="py-lineno">220</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-134" class="py-name"><a title="p4vasp.cmatrix.Vector.length
p4vasp.matrix.Vector.length" class="py-name" href="#" onclick="return doclink('link-134', 'length', 'link-133');">length</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L221"></a><tt class="py-lineno">221</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L222"></a><tt class="py-lineno">222</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">.</tt><tt class="py-name">basis</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-135" class="py-name"><a title="p4vasp.cmatrix.Vector.length
p4vasp.matrix.Vector.length" class="py-name" href="#" onclick="return doclink('link-135', 'length', 'link-133');">length</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L223"></a><tt class="py-lineno">223</tt>  <tt class="py-line"> </tt>
<a name="L224"></a><tt class="py-lineno">224</tt>  <tt class="py-line"> </tt>
<a name="L225"></a><tt class="py-lineno">225</tt>  <tt class="py-line"><tt class="py-comment">#  def setPlaneN(self,n=None):</tt> </tt>
<a name="L226"></a><tt class="py-lineno">226</tt>  <tt class="py-line"><tt class="py-comment">#    if self.charge is None:</tt> </tt>
<a name="L227"></a><tt class="py-lineno">227</tt>  <tt class="py-line"><tt class="py-comment">#      msg().error("Charge not available in STM applet.")</tt> </tt>
<a name="L228"></a><tt class="py-lineno">228</tt>  <tt class="py-line"><tt class="py-comment">#      return None</tt> </tt>
<a name="L229"></a><tt class="py-lineno">229</tt>  <tt class="py-line"><tt class="py-comment">#    self.initDir()</tt> </tt>
<a name="L230"></a><tt class="py-lineno">230</tt>  <tt class="py-line"><tt class="py-comment">#    if n is not None:</tt> </tt>
<a name="L231"></a><tt class="py-lineno">231</tt>  <tt class="py-line"><tt class="py-comment">#      self.setN(n)</tt> </tt>
<a name="L232"></a><tt class="py-lineno">232</tt>  <tt class="py-line"><tt class="py-comment">#    if self.dir==0:</tt> </tt>
<a name="L233"></a><tt class="py-lineno">233</tt>  <tt class="py-line"><tt class="py-comment">#      a=self.charge.getPlaneX(self.n)</tt> </tt>
<a name="L234"></a><tt class="py-lineno">234</tt>  <tt class="py-line"><tt class="py-comment">#    elif self.dir==1:</tt> </tt>
<a name="L235"></a><tt class="py-lineno">235</tt>  <tt class="py-line"><tt class="py-comment">#      a=self.charge.getPlaneY(self.n)</tt> </tt>
<a name="L236"></a><tt class="py-lineno">236</tt>  <tt class="py-line"><tt class="py-comment">#    else:</tt> </tt>
<a name="L237"></a><tt class="py-lineno">237</tt>  <tt class="py-line"><tt class="py-comment">#      a=self.charge.getPlaneZ(self.n)</tt> </tt>
<a name="L238"></a><tt class="py-lineno">238</tt>  <tt class="py-line"><tt class="py-comment">#    self.lo=a.getMinimum()</tt> </tt>
<a name="L239"></a><tt class="py-lineno">239</tt>  <tt class="py-line"><tt class="py-comment">#    self.hi=a.getMaximum()</tt> </tt>
<a name="L240"></a><tt class="py-lineno">240</tt>  <tt class="py-line"><tt class="py-comment">#    self.setFArray(a)</tt> </tt>
<a name="L241"></a><tt class="py-lineno">241</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.getCharge"></a><div id="STMWindowApplet.getCharge-def"><a name="L242"></a><tt class="py-lineno">242</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getCharge-toggle" onclick="return toggle('STMWindowApplet.getCharge');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getCharge">getCharge</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getCharge-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getCharge-expanded"><a name="L243"></a><tt class="py-lineno">243</tt>  <tt class="py-line">        <tt class="py-keyword">import</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt id="link-136" class="py-name" targets="Variable p4vasp.Array.path=p4vasp.Array-module.html#path,Variable p4vasp.Dictionary.path=p4vasp.Dictionary-module.html#path,Variable p4vasp.Structure.path=p4vasp.Structure-module.html#path,Variable p4vasp.applet.Applet.path=p4vasp.applet.Applet-module.html#path,Variable p4vasp.message.path=p4vasp.message-module.html#path,Variable p4vasp.repository.path=p4vasp.repository-module.html#path,Variable p4vasp.schedule'.path=p4vasp.schedule%27-module.html#path,Variable p4vasp.store.path=p4vasp.store-module.html#path,Variable p4vasp.util.path=p4vasp.util-module.html#path"><a title="p4vasp.Array.path
p4vasp.Dictionary.path
p4vasp.Structure.path
p4vasp.applet.Applet.path
p4vasp.message.path
p4vasp.repository.path
p4vasp.schedule'.path
p4vasp.store.path
p4vasp.util.path" class="py-name" href="#" onclick="return doclink('link-136', 'path', 'link-136');">path</a></tt> </tt>
<a name="L244"></a><tt class="py-lineno">244</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">src</tt><tt class="py-op">:</tt> </tt>
<a name="L245"></a><tt class="py-lineno">245</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L246"></a><tt class="py-lineno">246</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt id="link-137" class="py-name"><a title="p4vasp.Array.path
p4vasp.Dictionary.path
p4vasp.Structure.path
p4vasp.applet.Applet.path
p4vasp.message.path
p4vasp.repository.path
p4vasp.schedule'.path
p4vasp.store.path
p4vasp.util.path" class="py-name" href="#" onclick="return doclink('link-137', 'path', 'link-136');">path</a></tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">system</tt><tt class="py-op">.</tt><tt class="py-name">PATH</tt><tt class="py-op">+</tt><tt class="py-string">"PARCHG_SMOOTH"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L247"></a><tt class="py-lineno">247</tt>  <tt class="py-line">                    <tt id="link-138" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-138', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-139" class="py-name" targets="Method p4vasp.message.MessageDriver.status()=p4vasp.message.MessageDriver-class.html#status,Method p4vasp.schedule'.Process.status()=p4vasp.schedule%27.Process-class.html#status"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-139', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Loading PARCHG_SMOOTH"</tt><tt class="py-op">)</tt> </tt>
<a name="L248"></a><tt class="py-lineno">248</tt>  <tt class="py-line">                    <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt><tt class="py-op">=</tt><tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">Chgcar</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L249"></a><tt class="py-lineno">249</tt>  <tt class="py-line">                    <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt><tt class="py-op">.</tt><tt id="link-140" class="py-name" targets="Method p4vasp.Dictionary.Incar.read()=p4vasp.Dictionary.Incar-class.html#read,Method p4vasp.GraphPM.GraphProperty.read()=p4vasp.GraphPM.GraphProperty-class.html#read,Method p4vasp.Property.Property.read()=p4vasp.Property.Property-class.html#read,Method p4vasp.Structure.Structure.read()=p4vasp.Structure.Structure-class.html#read,Method p4vasp.cStructure.Structure.read()=p4vasp.cStructure.Structure-class.html#read,Method p4vasp.util.Parseable.read()=p4vasp.util.Parseable-class.html#read"><a title="p4vasp.Dictionary.Incar.read
p4vasp.GraphPM.GraphProperty.read
p4vasp.Property.Property.read
p4vasp.Structure.Structure.read
p4vasp.cStructure.Structure.read
p4vasp.util.Parseable.read" class="py-name" href="#" onclick="return doclink('link-140', 'read', 'link-140');">read</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">system</tt><tt class="py-op">.</tt><tt class="py-name">PATH</tt><tt class="py-op">+</tt><tt class="py-string">"PARCHG_SMOOTH"</tt><tt class="py-op">)</tt> </tt>
<a name="L250"></a><tt class="py-lineno">250</tt>  <tt class="py-line">                    <tt id="link-141" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-141', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-142" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-142', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"OK"</tt><tt class="py-op">)</tt> </tt>
<a name="L251"></a><tt class="py-lineno">251</tt>  <tt class="py-line">                    <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt> </tt>
<a name="L252"></a><tt class="py-lineno">252</tt>  <tt class="py-line">                <tt id="link-143" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-143', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-144" class="py-name"><a title="p4vasp.message.MessageDriver.error
p4vasp.schedule'.Process.error" class="py-name" href="#" onclick="return doclink('link-144', 'error', 'link-119');">error</a></tt><tt class="py-op">(</tt><tt class="py-string">"Smoothed PARCHG not available - press 'Smooth' to create."</tt><tt class="py-op">)</tt> </tt>
<a name="L253"></a><tt class="py-lineno">253</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt> </tt>
<a name="L254"></a><tt class="py-lineno">254</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt> </tt>
<a name="L255"></a><tt class="py-lineno">255</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L256"></a><tt class="py-lineno">256</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L257"></a><tt class="py-lineno">257</tt>  <tt class="py-line">                <tt id="link-145" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-145', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-146" class="py-name"><a title="p4vasp.message.MessageDriver.error
p4vasp.schedule'.Process.error" class="py-name" href="#" onclick="return doclink('link-146', 'error', 'link-119');">error</a></tt><tt class="py-op">(</tt><tt class="py-string">"PARCHG not available in STM applet."</tt><tt class="py-op">)</tt> </tt>
<a name="L258"></a><tt class="py-lineno">258</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt> </tt>
</div><a name="L259"></a><tt class="py-lineno">259</tt>  <tt class="py-line"> </tt>
<a name="L260"></a><tt class="py-lineno">260</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.updateOrigin"></a><div id="STMWindowApplet.updateOrigin-def"><a name="L261"></a><tt class="py-lineno">261</tt> <a class="py-toggle" href="#" id="STMWindowApplet.updateOrigin-toggle" onclick="return toggle('STMWindowApplet.updateOrigin');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateOrigin">updateOrigin</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.updateOrigin-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.updateOrigin-expanded"><a name="L262"></a><tt class="py-lineno">262</tt>  <tt class="py-line">        <tt class="py-name">orig</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-147" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-147', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">n1</tt><tt class="py-op">/</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b1</tt><tt class="py-op">+</tt><tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-148" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-148', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">n2</tt><tt class="py-op">/</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b2</tt> </tt>
<a name="L263"></a><tt class="py-lineno">263</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L264"></a><tt class="py-lineno">264</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-149" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.getMaxN" class="py-name" href="#" onclick="return doclink('link-149', 'getMaxN', 'link-116');">getMaxN</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L265"></a><tt class="py-lineno">265</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L266"></a><tt class="py-lineno">266</tt>  <tt class="py-line">                    <tt class="py-name">orig</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bz</tt><tt class="py-op">.</tt><tt id="link-150" class="py-name"><a title="p4vasp.cmatrix.Vector.length
p4vasp.matrix.Vector.length" class="py-name" href="#" onclick="return doclink('link-150', 'length', 'link-133');">length</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-151" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-151', 'n', 'link-50');">n</a></tt><tt class="py-op">/</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-152" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.getMaxN" class="py-name" href="#" onclick="return doclink('link-152', 'getMaxN', 'link-116');">getMaxN</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_offset</tt> </tt>
<a name="L267"></a><tt class="py-lineno">267</tt>  <tt class="py-line">                <tt class="py-keyword">elif</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L268"></a><tt class="py-lineno">268</tt>  <tt class="py-line">                    <tt class="py-name">orig</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">+=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bz</tt><tt class="py-op">.</tt><tt id="link-153" class="py-name"><a title="p4vasp.cmatrix.Vector.length
p4vasp.matrix.Vector.length" class="py-name" href="#" onclick="return doclink('link-153', 'length', 'link-133');">length</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-154" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-154', 'n', 'link-50');">n</a></tt><tt class="py-op">/</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-155" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.getMaxN" class="py-name" href="#" onclick="return doclink('link-155', 'getMaxN', 'link-116');">getMaxN</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_offset</tt> </tt>
<a name="L269"></a><tt class="py-lineno">269</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L270"></a><tt class="py-lineno">270</tt>  <tt class="py-line">                    <tt class="py-name">orig</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">+=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">bz</tt><tt class="py-op">.</tt><tt id="link-156" class="py-name"><a title="p4vasp.cmatrix.Vector.length
p4vasp.matrix.Vector.length" class="py-name" href="#" onclick="return doclink('link-156', 'length', 'link-133');">length</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-157" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-157', 'n', 'link-50');">n</a></tt><tt class="py-op">/</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-158" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.getMaxN" class="py-name" href="#" onclick="return doclink('link-158', 'getMaxN', 'link-116');">getMaxN</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_offset</tt> </tt>
<a name="L271"></a><tt class="py-lineno">271</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L272"></a><tt class="py-lineno">272</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L273"></a><tt class="py-lineno">273</tt>  <tt class="py-line">                <tt class="py-name">orig</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_offset</tt> </tt>
<a name="L274"></a><tt class="py-lineno">274</tt>  <tt class="py-line">            <tt class="py-keyword">elif</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L275"></a><tt class="py-lineno">275</tt>  <tt class="py-line">                <tt class="py-name">orig</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">+=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_offset</tt> </tt>
<a name="L276"></a><tt class="py-lineno">276</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L277"></a><tt class="py-lineno">277</tt>  <tt class="py-line">                <tt class="py-name">orig</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">+=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_offset</tt> </tt>
<a name="L278"></a><tt class="py-lineno">278</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-159" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-159', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">setOrigin</tt><tt class="py-op">(</tt><tt class="py-name">orig</tt><tt class="py-op">.</tt><tt class="py-name">pointer</tt><tt class="py-op">)</tt> </tt>
</div><a name="L279"></a><tt class="py-lineno">279</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.updatePlane"></a><div id="STMWindowApplet.updatePlane-def"><a name="L280"></a><tt class="py-lineno">280</tt> <a class="py-toggle" href="#" id="STMWindowApplet.updatePlane-toggle" onclick="return toggle('STMWindowApplet.updatePlane');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updatePlane">updatePlane</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.updatePlane-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.updatePlane-expanded"><a name="L281"></a><tt class="py-lineno">281</tt>  <tt class="py-line">        <tt id="link-160" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-160', 'c', 'link-68');">c</a></tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-161" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.getCharge" class="py-name" href="#" onclick="return doclink('link-161', 'getCharge', 'link-90');">getCharge</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L282"></a><tt class="py-lineno">282</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-162" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-162', 'c', 'link-68');">c</a></tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L283"></a><tt class="py-lineno">283</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
<a name="L284"></a><tt class="py-lineno">284</tt>  <tt class="py-line">        <tt class="py-name">s</tt><tt class="py-op">=</tt><tt id="link-163" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-163', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-164" class="py-name"><a title="p4vasp.cStructure" class="py-name" href="#" onclick="return doclink('link-164', 'cStructure', 'link-17');">cStructure</a></tt><tt class="py-op">.</tt><tt id="link-165" class="py-name"><a title="p4vasp.Structure
p4vasp.Structure.Structure
p4vasp.cStructure.Structure" class="py-name" href="#" onclick="return doclink('link-165', 'Structure', 'link-15');">Structure</a></tt><tt class="py-op">(</tt><tt class="py-name">pointer</tt><tt class="py-op">=</tt><tt id="link-166" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-166', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">)</tt> </tt>
<a name="L285"></a><tt class="py-lineno">285</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-167" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.initDir()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#initDir"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.initDir" class="py-name" href="#" onclick="return doclink('link-167', 'initDir', 'link-167');">initDir</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt> </tt>
<a name="L286"></a><tt class="py-lineno">286</tt>  <tt class="py-line"> </tt>
<a name="L287"></a><tt class="py-lineno">287</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-168" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.updateOrigin()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateOrigin"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.updateOrigin" class="py-name" href="#" onclick="return doclink('link-168', 'updateOrigin', 'link-168');">updateOrigin</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L288"></a><tt class="py-lineno">288</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L289"></a><tt class="py-lineno">289</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L290"></a><tt class="py-lineno">290</tt>  <tt class="py-line">                <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-169" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-169', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">getPlaneX</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-170" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-170', 'n', 'link-50');">n</a></tt><tt class="py-op">)</tt> </tt>
<a name="L291"></a><tt class="py-lineno">291</tt>  <tt class="py-line">            <tt class="py-keyword">elif</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L292"></a><tt class="py-lineno">292</tt>  <tt class="py-line">                <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-171" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-171', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">getPlaneY</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-172" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-172', 'n', 'link-50');">n</a></tt><tt class="py-op">)</tt> </tt>
<a name="L293"></a><tt class="py-lineno">293</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L294"></a><tt class="py-lineno">294</tt>  <tt class="py-line">                <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-173" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-173', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">getPlaneZ</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-174" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-174', 'n', 'link-50');">n</a></tt><tt class="py-op">)</tt> </tt>
<a name="L295"></a><tt class="py-lineno">295</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L296"></a><tt class="py-lineno">296</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">interpolation</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L297"></a><tt class="py-lineno">297</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L298"></a><tt class="py-lineno">298</tt>  <tt class="py-line">                    <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-175" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-175', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">createCCPlaneX</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
<a name="L299"></a><tt class="py-lineno">299</tt>  <tt class="py-line">                <tt class="py-keyword">elif</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L300"></a><tt class="py-lineno">300</tt>  <tt class="py-line">                    <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-176" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-176', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">createCCPlaneY</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
<a name="L301"></a><tt class="py-lineno">301</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L302"></a><tt class="py-lineno">302</tt>  <tt class="py-line">                    <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-177" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-177', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">createCCPlaneZ</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
<a name="L303"></a><tt class="py-lineno">303</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L304"></a><tt class="py-lineno">304</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L305"></a><tt class="py-lineno">305</tt>  <tt class="py-line">                    <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-178" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-178', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">createCCPlaneCubicX</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
<a name="L306"></a><tt class="py-lineno">306</tt>  <tt class="py-line">                <tt class="py-keyword">elif</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L307"></a><tt class="py-lineno">307</tt>  <tt class="py-line">                    <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-179" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-179', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">createCCPlaneCubicY</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
<a name="L308"></a><tt class="py-lineno">308</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L309"></a><tt class="py-lineno">309</tt>  <tt class="py-line">                    <tt class="py-name">a</tt><tt class="py-op">=</tt><tt id="link-180" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-180', 'c', 'link-68');">c</a></tt><tt class="py-op">.</tt><tt class="py-name">createCCPlaneCubicZ</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">value</tt><tt class="py-op">)</tt> </tt>
<a name="L310"></a><tt class="py-lineno">310</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postinterpolation</tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L311"></a><tt class="py-lineno">311</tt>  <tt class="py-line">            <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">cubicInterpolation</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postinterpolation</tt><tt class="py-op">,</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postinterpolation</tt><tt class="py-op">)</tt> </tt>
<a name="L312"></a><tt class="py-lineno">312</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postsigma</tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> <tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postn</tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L313"></a><tt class="py-lineno">313</tt>  <tt class="py-line">            <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">smear</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postsigma</tt><tt class="py-op">,</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postn</tt><tt class="py-op">,</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">postn</tt><tt class="py-op">,</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b1</tt><tt class="py-op">.</tt><tt class="py-name">pointer</tt><tt class="py-op">,</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">b2</tt><tt class="py-op">.</tt><tt class="py-name">pointer</tt><tt class="py-op">)</tt> </tt>
<a name="L314"></a><tt class="py-lineno">314</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">lo</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">getMinimum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L315"></a><tt class="py-lineno">315</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hi</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">getMaximum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L316"></a><tt class="py-lineno">316</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-181" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.setFArray()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setFArray"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.setFArray" class="py-name" href="#" onclick="return doclink('link-181', 'setFArray', 'link-181');">setFArray</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
</div><a name="L317"></a><tt class="py-lineno">317</tt>  <tt class="py-line"> </tt>
<a name="L318"></a><tt class="py-lineno">318</tt>  <tt class="py-line"><tt class="py-comment">#  def setSmoothPlaneNGen(self,n=None):</tt> </tt>
<a name="L319"></a><tt class="py-lineno">319</tt>  <tt class="py-line"><tt class="py-comment">#    msg().status("STM Smoothing")</tt> </tt>
<a name="L320"></a><tt class="py-lineno">320</tt>  <tt class="py-line"><tt class="py-comment">#    yield 1</tt> </tt>
<a name="L321"></a><tt class="py-lineno">321</tt>  <tt class="py-line"><tt class="py-comment">#    if self.charge is None:</tt> </tt>
<a name="L322"></a><tt class="py-lineno">322</tt>  <tt class="py-line"><tt class="py-comment">#      msg().error("Charge not available in STM applet.")</tt> </tt>
<a name="L323"></a><tt class="py-lineno">323</tt>  <tt class="py-line"><tt class="py-comment">#    elif self.structure is None:</tt> </tt>
<a name="L324"></a><tt class="py-lineno">324</tt>  <tt class="py-line"><tt class="py-comment">#      msg().error("Structure not available in STM applet.")</tt> </tt>
<a name="L325"></a><tt class="py-lineno">325</tt>  <tt class="py-line"><tt class="py-comment">#    else:</tt> </tt>
<a name="L326"></a><tt class="py-lineno">326</tt>  <tt class="py-line"><tt class="py-comment">#      self.initDir()</tt> </tt>
<a name="L327"></a><tt class="py-lineno">327</tt>  <tt class="py-line"><tt class="py-comment">#      if n is not None:</tt> </tt>
<a name="L328"></a><tt class="py-lineno">328</tt>  <tt class="py-line"><tt class="py-comment">#       self.setN(n)</tt> </tt>
<a name="L329"></a><tt class="py-lineno">329</tt>  <tt class="py-line"><tt class="py-comment">#      else:</tt> </tt>
<a name="L330"></a><tt class="py-lineno">330</tt>  <tt class="py-line"><tt class="py-comment">#       self.setN(self.n)</tt> </tt>
<a name="L331"></a><tt class="py-lineno">331</tt>  <tt class="py-line"><tt class="py-comment">#      msg().status("STM Smoothing.")</tt> </tt>
<a name="L332"></a><tt class="py-lineno">332</tt>  <tt class="py-line"><tt class="py-comment">#      yield 1</tt> </tt>
<a name="L333"></a><tt class="py-lineno">333</tt>  <tt class="py-line"><tt class="py-comment">#      if self.dir==0:</tt> </tt>
<a name="L334"></a><tt class="py-lineno">334</tt>  <tt class="py-line"><tt class="py-comment">#       ap=self.charge.createSmoothPlaneProcessX(self.n,self.sigmax,self.sigmay,self.sigmaz,self.limit)</tt> </tt>
<a name="L335"></a><tt class="py-lineno">335</tt>  <tt class="py-line"><tt class="py-comment">#      elif self.dir==1:</tt> </tt>
<a name="L336"></a><tt class="py-lineno">336</tt>  <tt class="py-line"><tt class="py-comment">#       ap=self.charge.createSmoothPlaneProcessY(self.n,self.sigmax,self.sigmay,self.sigmaz,self.limit)</tt> </tt>
<a name="L337"></a><tt class="py-lineno">337</tt>  <tt class="py-line"><tt class="py-comment">#      else:</tt> </tt>
<a name="L338"></a><tt class="py-lineno">338</tt>  <tt class="py-line"><tt class="py-comment">#       ap=self.charge.createSmoothPlaneProcessZ(self.n,self.sigmax,self.sigmay,self.sigmaz,self.limit)</tt> </tt>
<a name="L339"></a><tt class="py-lineno">339</tt>  <tt class="py-line"><tt class="py-comment">#      msg().status("STM Smoothing..")</tt> </tt>
<a name="L340"></a><tt class="py-lineno">340</tt>  <tt class="py-line"><tt class="py-comment">#      yield 1</tt> </tt>
<a name="L341"></a><tt class="py-lineno">341</tt>  <tt class="py-line"><tt class="py-comment">#      while ap.next():</tt> </tt>
<a name="L342"></a><tt class="py-lineno">342</tt>  <tt class="py-line"><tt class="py-comment">#       msg().status(ap.status())</tt> </tt>
<a name="L343"></a><tt class="py-lineno">343</tt>  <tt class="py-line"><tt class="py-comment">#       msg().step(ap.step(),ap.total())</tt> </tt>
<a name="L344"></a><tt class="py-lineno">344</tt>  <tt class="py-line"><tt class="py-comment">#       yield 1</tt> </tt>
<a name="L345"></a><tt class="py-lineno">345</tt>  <tt class="py-line"><tt class="py-comment">#      msg().status("STM OK")</tt> </tt>
<a name="L346"></a><tt class="py-lineno">346</tt>  <tt class="py-line"><tt class="py-comment">#      yield 1</tt> </tt>
<a name="L347"></a><tt class="py-lineno">347</tt>  <tt class="py-line"><tt class="py-comment">#      self.setFArray(ap.getPlane())</tt> </tt>
<a name="L348"></a><tt class="py-lineno">348</tt>  <tt class="py-line"><tt class="py-comment">#      msg().status("OK")</tt> </tt>
<a name="L349"></a><tt class="py-lineno">349</tt>  <tt class="py-line"><tt class="py-comment">#      msg().step(0,1)</tt> </tt>
<a name="L350"></a><tt class="py-lineno">350</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.updateSmoothGen"></a><div id="STMWindowApplet.updateSmoothGen-def"><a name="L351"></a><tt class="py-lineno">351</tt> <a class="py-toggle" href="#" id="STMWindowApplet.updateSmoothGen-toggle" onclick="return toggle('STMWindowApplet.updateSmoothGen');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateSmoothGen">updateSmoothGen</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.updateSmoothGen-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.updateSmoothGen-expanded"><a name="L352"></a><tt class="py-lineno">352</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L353"></a><tt class="py-lineno">353</tt>  <tt class="py-line">            <tt id="link-182" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-182', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-183" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-183', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Start smearing"</tt><tt class="py-op">)</tt> </tt>
<a name="L354"></a><tt class="py-lineno">354</tt>  <tt class="py-line">            <tt class="py-keyword">yield</tt> <tt class="py-number">1</tt> </tt>
<a name="L355"></a><tt class="py-lineno">355</tt>  <tt class="py-line">            <tt class="py-name">chsmear</tt><tt class="py-op">=</tt><tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">GaussianChgcarSmear</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L356"></a><tt class="py-lineno">356</tt>  <tt class="py-line">            <tt class="py-name">chsmear</tt><tt class="py-op">.</tt><tt class="py-name">lx</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">n1</tt> </tt>
<a name="L357"></a><tt class="py-lineno">357</tt>  <tt class="py-line">            <tt class="py-name">chsmear</tt><tt class="py-op">.</tt><tt class="py-name">ly</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">n2</tt> </tt>
<a name="L358"></a><tt class="py-lineno">358</tt>  <tt class="py-line">            <tt class="py-name">chsmear</tt><tt class="py-op">.</tt><tt class="py-name">lz</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">n3</tt> </tt>
<a name="L359"></a><tt class="py-lineno">359</tt>  <tt class="py-line">            <tt class="py-name">chsmear</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">dir</tt> </tt>
<a name="L360"></a><tt class="py-lineno">360</tt>  <tt class="py-line">            <tt class="py-name">chsmear</tt><tt class="py-op">.</tt><tt class="py-name">horizontal_sigma</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sh</tt> </tt>
<a name="L361"></a><tt class="py-lineno">361</tt>  <tt class="py-line">            <tt class="py-name">chsmear</tt><tt class="py-op">.</tt><tt class="py-name">vertical_sigma</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sv</tt> </tt>
<a name="L362"></a><tt class="py-lineno">362</tt>  <tt class="py-line"><tt class="py-comment">#      chsmear.setChgcar(self.charge)</tt> </tt>
<a name="L363"></a><tt class="py-lineno">363</tt>  <tt class="py-line"> </tt>
<a name="L364"></a><tt class="py-lineno">364</tt>  <tt class="py-line">            <tt class="py-name">cap</tt><tt class="py-op">=</tt><tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">ChgcarSmearProcess</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">charge</tt><tt class="py-op">,</tt><tt class="py-name">chsmear</tt><tt class="py-op">)</tt> </tt>
<a name="L365"></a><tt class="py-lineno">365</tt>  <tt class="py-line">            <tt id="link-184" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-184', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-185" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-185', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Start smearing."</tt><tt class="py-op">)</tt> </tt>
<a name="L366"></a><tt class="py-lineno">366</tt>  <tt class="py-line">            <tt class="py-keyword">yield</tt> <tt class="py-number">1</tt> </tt>
<a name="L367"></a><tt class="py-lineno">367</tt>  <tt class="py-line">            <tt class="py-keyword">while</tt> <tt class="py-name">cap</tt><tt class="py-op">.</tt><tt id="link-186" class="py-name" targets="Method p4vasp.schedule'.Process.next()=p4vasp.schedule%27.Process-class.html#next,Method p4vasp.schedule'.Scheduler.next()=p4vasp.schedule%27.Scheduler-class.html#next"><a title="p4vasp.schedule'.Process.next
p4vasp.schedule'.Scheduler.next" class="py-name" href="#" onclick="return doclink('link-186', 'next', 'link-186');">next</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L368"></a><tt class="py-lineno">368</tt>  <tt class="py-line">                <tt id="link-187" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-187', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-188" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-188', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-name">cap</tt><tt class="py-op">.</tt><tt id="link-189" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-189', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L369"></a><tt class="py-lineno">369</tt>  <tt class="py-line">                <tt id="link-190" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-190', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-191" class="py-name" targets="Method p4vasp.message.MessageDriver.step()=p4vasp.message.MessageDriver-class.html#step,Method p4vasp.schedule'.Process.step()=p4vasp.schedule%27.Process-class.html#step"><a title="p4vasp.message.MessageDriver.step
p4vasp.schedule'.Process.step" class="py-name" href="#" onclick="return doclink('link-191', 'step', 'link-191');">step</a></tt><tt class="py-op">(</tt><tt class="py-name">cap</tt><tt class="py-op">.</tt><tt id="link-192" class="py-name"><a title="p4vasp.message.MessageDriver.step
p4vasp.schedule'.Process.step" class="py-name" href="#" onclick="return doclink('link-192', 'step', 'link-191');">step</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">cap</tt><tt class="py-op">.</tt><tt id="link-193" class="py-name" targets="Method p4vasp.schedule'.Process.total()=p4vasp.schedule%27.Process-class.html#total"><a title="p4vasp.schedule'.Process.total" class="py-name" href="#" onclick="return doclink('link-193', 'total', 'link-193');">total</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L370"></a><tt class="py-lineno">370</tt>  <tt class="py-line">                <tt class="py-keyword">yield</tt> <tt class="py-number">1</tt> </tt>
<a name="L371"></a><tt class="py-lineno">371</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt><tt class="py-op">=</tt><tt class="py-name">cap</tt><tt class="py-op">.</tt><tt id="link-194" class="py-name"><a title="p4vasp.ODPdom.AttributeList.get
p4vasp.ODPdom.NamedNodeMap.get
p4vasp.Property.Property.get
p4vasp.cStructure.Structure.get
p4vasp.cmatrix.Matrix.get
p4vasp.cmatrix.Vector.get
p4vasp.db.Query.get
p4vasp.matrix.Matrix.get
p4vasp.matrix.Vector.get
p4vasp.paint3d.Paint3DInterface.Paint3DRecorder.get" class="py-name" href="#" onclick="return doclink('link-194', 'get', 'link-69');">get</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-195" class="py-name"><a title="p4vasp.Selection.Selection.clone
p4vasp.applet.Applet.Applet.clone
p4vasp.applet.Applet.GraphApplet.clone
p4vasp.applet.ElectronicApplet.Line.clone
p4vasp.applet.GraphWindowApplet.GraphWindowApplet.clone
p4vasp.cStructure.AtomtypesRecord.clone
p4vasp.cStructure.Structure.clone
p4vasp.cmatrix.Matrix.clone
p4vasp.cmatrix.Vector.clone
p4vasp.graph.Axis.clone
p4vasp.graph.Cloneable.clone
p4vasp.graph.Graph.clone
p4vasp.graph.Set.clone
p4vasp.graph.World.clone
p4vasp.matrix.Matrix.clone
p4vasp.matrix.Vector.clone
p4vasp.paint3d.data.AmbientLight.clone
p4vasp.paint3d.data.Arrow.clone
p4vasp.paint3d.data.Background.clone
p4vasp.paint3d.data.ColorMaterial.clone
p4vasp.paint3d.data.Cone.clone
p4vasp.paint3d.data.Cylinder.clone
p4vasp.paint3d.data.Frame.clone
p4vasp.paint3d.data.Line.clone
p4vasp.paint3d.data.Mesh.clone
p4vasp.paint3d.data.OrthographicCamera.clone
p4vasp.paint3d.data.PerspectiveCamera.clone
p4vasp.paint3d.data.PointLight.clone
p4vasp.paint3d.data.Sphere.clone" class="py-name" href="#" onclick="return doclink('link-195', 'clone', 'link-73');">clone</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L372"></a><tt class="py-lineno">372</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">smooth_charge</tt><tt class="py-op">.</tt><tt id="link-196" class="py-name" targets="Method p4vasp.Dictionary.Incar.write()=p4vasp.Dictionary.Incar-class.html#write,Method p4vasp.Structure.Structure.write()=p4vasp.Structure.Structure-class.html#write,Method p4vasp.SystemPM.SetupPM.write()=p4vasp.SystemPM.SetupPM-class.html#write,Method p4vasp.cStructure.Structure.write()=p4vasp.cStructure.Structure-class.html#write,Method p4vasp.cmatrix.Vector.write()=p4vasp.cmatrix.Vector-class.html#write,Method p4vasp.matrix.Vector.write()=p4vasp.matrix.Vector-class.html#write,Method p4vasp.message.DummyFile.write()=p4vasp.message.DummyFile-class.html#write,Method p4vasp.message.PrintFile.write()=p4vasp.message.PrintFile-class.html#write,Method p4vasp.paint3d.ColladaPaint3D.ColladaPaint3D.write()=p4vasp.paint3d.ColladaPaint3D.ColladaPaint3D-class.html#write,Method p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.write()=p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D-class.html#write,Method p4vasp.paint3d.Paint3DInterface.Paint3DInterface.write()=p4vasp.paint3d.Paint3DInterface.Paint3DInterface-class.html#write,Method p4vasp.paint3d.PovrayPaint3D.ExtendedPovrayPaint3D.write()=p4vasp.paint3d.PovrayPaint3D.ExtendedPovrayPaint3D-class.html#write,Method p4vasp.paint3d.PovrayPaint3D.PovrayPaint3D.write()=p4vasp.paint3d.PovrayPaint3D.PovrayPaint3D-class.html#write,Method p4vasp.paint3d.PovrayPaint3D.PovrayPaint3DFrame.write()=p4vasp.paint3d.PovrayPaint3D.PovrayPaint3DFrame-class.html#write,Method p4vasp.store.AttributeProfile.write()=p4vasp.store.AttributeProfile-class.html#write,Method p4vasp.store.Profile.write()=p4vasp.store.Profile-class.html#write"><a title="p4vasp.Dictionary.Incar.write
p4vasp.Structure.Structure.write
p4vasp.SystemPM.SetupPM.write
p4vasp.cStructure.Structure.write
p4vasp.cmatrix.Vector.write
p4vasp.matrix.Vector.write
p4vasp.message.DummyFile.write
p4vasp.message.PrintFile.write
p4vasp.paint3d.ColladaPaint3D.ColladaPaint3D.write
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.write
p4vasp.paint3d.Paint3DInterface.Paint3DInterface.write
p4vasp.paint3d.PovrayPaint3D.ExtendedPovrayPaint3D.write
p4vasp.paint3d.PovrayPaint3D.PovrayPaint3D.write
p4vasp.paint3d.PovrayPaint3D.PovrayPaint3DFrame.write
p4vasp.store.AttributeProfile.write
p4vasp.store.Profile.write" class="py-name" href="#" onclick="return doclink('link-196', 'write', 'link-196');">write</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">system</tt><tt class="py-op">.</tt><tt class="py-name">PATH</tt><tt class="py-op">+</tt><tt class="py-string">"PARCHG_SMOOTH"</tt><tt class="py-op">)</tt> </tt>
<a name="L373"></a><tt class="py-lineno">373</tt>  <tt class="py-line">            <tt id="link-197" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-197', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-198" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-198', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"OK"</tt><tt class="py-op">)</tt> </tt>
<a name="L374"></a><tt class="py-lineno">374</tt>  <tt class="py-line">            <tt id="link-199" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-199', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-200" class="py-name"><a title="p4vasp.message.MessageDriver.step
p4vasp.schedule'.Process.step" class="py-name" href="#" onclick="return doclink('link-200', 'step', 'link-191');">step</a></tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L375"></a><tt class="py-lineno">375</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-201" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.updatePlane" class="py-name" href="#" onclick="return doclink('link-201', 'updatePlane', 'link-81');">updatePlane</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L376"></a><tt class="py-lineno">376</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.setFArray"></a><div id="STMWindowApplet.setFArray-def"><a name="L377"></a><tt class="py-lineno">377</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setFArray-toggle" onclick="return toggle('STMWindowApplet.setFArray');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setFArray">setFArray</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">a</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setFArray-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setFArray-expanded"><a name="L378"></a><tt class="py-lineno">378</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">a</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L379"></a><tt class="py-lineno">379</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">None</tt> </tt>
<a name="L380"></a><tt class="py-lineno">380</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">minimum</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L381"></a><tt class="py-lineno">381</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">maximum</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L382"></a><tt class="py-lineno">382</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sigma</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L383"></a><tt class="py-lineno">383</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-202" class="py-name"><a title="p4vasp.applet.MoveApplet.average
p4vasp.applet.RotateApplet.average" class="py-name" href="#" onclick="return doclink('link-202', 'average', 'link-52');">average</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L384"></a><tt class="py-lineno">384</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-203" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-203', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt id="link-204" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.setFArray" class="py-name" href="#" onclick="return doclink('link-204', 'setFArray', 'link-181');">setFArray</a></tt><tt class="py-op">(</tt><tt class="py-name">None</tt><tt class="py-op">)</tt> </tt>
<a name="L385"></a><tt class="py-lineno">385</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-205" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-205', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt id="link-206" class="py-name" targets="Method p4vasp.Structure.Structure.scale()=p4vasp.Structure.Structure-class.html#scale"><a title="p4vasp.Structure.Structure.scale" class="py-name" href="#" onclick="return doclink('link-206', 'scale', 'link-206');">scale</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L386"></a><tt class="py-lineno">386</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L387"></a><tt class="py-lineno">387</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">a</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L388"></a><tt class="py-lineno">388</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">a</tt> </tt>
<a name="L389"></a><tt class="py-lineno">389</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">minimum</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">getMinimum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L390"></a><tt class="py-lineno">390</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">maximum</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">getMaximum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L391"></a><tt class="py-lineno">391</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sigma</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">getSigma</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L392"></a><tt class="py-lineno">392</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-207" class="py-name"><a title="p4vasp.applet.MoveApplet.average
p4vasp.applet.RotateApplet.average" class="py-name" href="#" onclick="return doclink('link-207', 'average', 'link-52');">average</a></tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">getAverage</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L393"></a><tt class="py-lineno">393</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-208" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-208', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt id="link-209" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.setFArray" class="py-name" href="#" onclick="return doclink('link-209', 'setFArray', 'link-181');">setFArray</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L394"></a><tt class="py-lineno">394</tt>  <tt class="py-line">            <tt class="py-name">sc</tt><tt class="py-op">=</tt><tt class="py-name">abs</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">maximum</tt><tt class="py-op">-</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">minimum</tt><tt class="py-op">)</tt> </tt>
<a name="L395"></a><tt class="py-lineno">395</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">sc</tt><tt class="py-op">:</tt> </tt>
<a name="L396"></a><tt class="py-lineno">396</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-210" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-210', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt id="link-211" class="py-name"><a title="p4vasp.Structure.Structure.scale" class="py-name" href="#" onclick="return doclink('link-211', 'scale', 'link-206');">scale</a></tt><tt class="py-op">=</tt><tt class="py-number">1.0</tt><tt class="py-op">/</tt><tt class="py-name">sc</tt> </tt>
<a name="L397"></a><tt class="py-lineno">397</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L398"></a><tt class="py-lineno">398</tt>  <tt class="py-line">                <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-212" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-212', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt id="link-213" class="py-name"><a title="p4vasp.Structure.Structure.scale" class="py-name" href="#" onclick="return doclink('link-213', 'scale', 'link-206');">scale</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L399"></a><tt class="py-lineno">399</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-214" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.redraw()=p4vasp.StructureWindow.StructureWindow-class.html#redraw,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.redraw()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#redraw"><a title="p4vasp.StructureWindow.StructureWindow.redraw
p4vasp.applet.STMWindowApplet.STMWindowApplet.redraw" class="py-name" href="#" onclick="return doclink('link-214', 'redraw', 'link-214');">redraw</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L400"></a><tt class="py-lineno">400</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.redraw"></a><div id="STMWindowApplet.redraw-def"><a name="L401"></a><tt class="py-lineno">401</tt> <a class="py-toggle" href="#" id="STMWindowApplet.redraw-toggle" onclick="return toggle('STMWindowApplet.redraw');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#redraw">redraw</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.redraw-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.redraw-expanded"><a name="L402"></a><tt class="py-lineno">402</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">inv</tt><tt class="py-op">:</tt> </tt>
<a name="L403"></a><tt class="py-lineno">403</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-215" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-215', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">lo</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hi</tt> </tt>
<a name="L404"></a><tt class="py-lineno">404</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-216" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-216', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">hi</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">lo</tt> </tt>
<a name="L405"></a><tt class="py-lineno">405</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L406"></a><tt class="py-lineno">406</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-217" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-217', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">lo</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">lo</tt> </tt>
<a name="L407"></a><tt class="py-lineno">407</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-218" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-218', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">hi</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hi</tt> </tt>
<a name="L408"></a><tt class="py-lineno">408</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">win</tt><tt class="py-op">.</tt><tt id="link-219" class="py-name"><a title="p4vasp.StructureWindow.StructureWindow.redraw
p4vasp.applet.STMWindowApplet.STMWindowApplet.redraw" class="py-name" href="#" onclick="return doclink('link-219', 'redraw', 'link-214');">redraw</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L409"></a><tt class="py-lineno">409</tt>  <tt class="py-line">        <tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">VisSync</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L410"></a><tt class="py-lineno">410</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.setClamp"></a><div id="STMWindowApplet.setClamp-def"><a name="L411"></a><tt class="py-lineno">411</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setClamp-toggle" onclick="return toggle('STMWindowApplet.setClamp');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setClamp">setClamp</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">c</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setClamp-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setClamp-expanded"><a name="L412"></a><tt class="py-lineno">412</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-220" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-220', 'c', 'link-68');">c</a></tt><tt class="py-op">==</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-221" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_THRESHOLD" class="py-name" href="#" onclick="return doclink('link-221', 'CLAMP_THRESHOLD', 'link-28');">CLAMP_THRESHOLD</a></tt><tt class="py-op">:</tt> </tt>
<a name="L413"></a><tt class="py-lineno">413</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">=</tt><tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">ThresholdClamp</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L414"></a><tt class="py-lineno">414</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">.</tt><tt class="py-name">thisown</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L415"></a><tt class="py-lineno">415</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp_type</tt><tt class="py-op">=</tt><tt id="link-222" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-222', 'c', 'link-68');">c</a></tt> </tt>
<a name="L416"></a><tt class="py-lineno">416</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt id="link-223" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-223', 'c', 'link-68');">c</a></tt><tt class="py-op">==</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-224" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_COS" class="py-name" href="#" onclick="return doclink('link-224', 'CLAMP_COS', 'link-29');">CLAMP_COS</a></tt><tt class="py-op">:</tt> </tt>
<a name="L417"></a><tt class="py-lineno">417</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">=</tt><tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">CosClamp</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L418"></a><tt class="py-lineno">418</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">.</tt><tt class="py-name">thisown</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L419"></a><tt class="py-lineno">419</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp_type</tt><tt class="py-op">=</tt><tt id="link-225" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-225', 'c', 'link-68');">c</a></tt> </tt>
<a name="L420"></a><tt class="py-lineno">420</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt id="link-226" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-226', 'c', 'link-68');">c</a></tt><tt class="py-op">==</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-227" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_ATAN" class="py-name" href="#" onclick="return doclink('link-227', 'CLAMP_ATAN', 'link-30');">CLAMP_ATAN</a></tt><tt class="py-op">:</tt> </tt>
<a name="L421"></a><tt class="py-lineno">421</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">=</tt><tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">AtanClamp</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L422"></a><tt class="py-lineno">422</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">.</tt><tt class="py-name">thisown</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L423"></a><tt class="py-lineno">423</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp_type</tt><tt class="py-op">=</tt><tt id="link-228" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-228', 'c', 'link-68');">c</a></tt> </tt>
<a name="L424"></a><tt class="py-lineno">424</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt id="link-229" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-229', 'c', 'link-68');">c</a></tt><tt class="py-op">==</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-230" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_FERMI" class="py-name" href="#" onclick="return doclink('link-230', 'CLAMP_FERMI', 'link-31');">CLAMP_FERMI</a></tt><tt class="py-op">:</tt> </tt>
<a name="L425"></a><tt class="py-lineno">425</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">=</tt><tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">FermiClamp</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L426"></a><tt class="py-lineno">426</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">.</tt><tt class="py-name">thisown</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L427"></a><tt class="py-lineno">427</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp_type</tt><tt class="py-op">=</tt><tt id="link-231" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-231', 'c', 'link-68');">c</a></tt> </tt>
<a name="L428"></a><tt class="py-lineno">428</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L429"></a><tt class="py-lineno">429</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">=</tt><tt id="link-232" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-232', 'c', 'link-68');">c</a></tt> </tt>
<a name="L430"></a><tt class="py-lineno">430</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">.</tt><tt class="py-name">thisown</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L431"></a><tt class="py-lineno">431</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp_type</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-233" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.CLAMP_OTHER" class="py-name" href="#" onclick="return doclink('link-233', 'CLAMP_OTHER', 'link-27');">CLAMP_OTHER</a></tt> </tt>
<a name="L432"></a><tt class="py-lineno">432</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-234" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-234', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt id="link-235" class="py-name" targets="Method p4vasp.applet.STMWindowApplet.STMWindowApplet.setClamp()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setClamp"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.setClamp" class="py-name" href="#" onclick="return doclink('link-235', 'setClamp', 'link-235');">setClamp</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">clamp</tt><tt class="py-op">)</tt> </tt>
<a name="L433"></a><tt class="py-lineno">433</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-236" class="py-name"><a title="p4vasp.StructureWindow.StructureWindow.redraw
p4vasp.applet.STMWindowApplet.STMWindowApplet.redraw" class="py-name" href="#" onclick="return doclink('link-236', 'redraw', 'link-214');">redraw</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L434"></a><tt class="py-lineno">434</tt>  <tt class="py-line"> </tt>
<a name="L435"></a><tt class="py-lineno">435</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.showStructureWindow"></a><div id="STMWindowApplet.showStructureWindow-def"><a name="L436"></a><tt class="py-lineno">436</tt> <a class="py-toggle" href="#" id="STMWindowApplet.showStructureWindow-toggle" onclick="return toggle('STMWindowApplet.showStructureWindow');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#showStructureWindow">showStructureWindow</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.showStructureWindow-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.showStructureWindow-expanded"><a name="L437"></a><tt class="py-lineno">437</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">win</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L438"></a><tt class="py-lineno">438</tt>  <tt class="py-line">            <tt class="py-name">l</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L439"></a><tt class="py-lineno">439</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">a</tt> <tt class="py-keyword">in</tt> <tt id="link-237" class="py-name"><a title="p4vasp.applet.applets" class="py-name" href="#" onclick="return doclink('link-237', 'applets', 'link-82');">applets</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L440"></a><tt class="py-lineno">440</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">isinstance</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt id="link-238" class="py-name" targets="Module p4vasp.applet.STMWindowApplet=p4vasp.applet.STMWindowApplet-module.html,Class p4vasp.applet.STMWindowApplet.STMWindowApplet=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html"><a title="p4vasp.applet.STMWindowApplet
p4vasp.applet.STMWindowApplet.STMWindowApplet" class="py-name" href="#" onclick="return doclink('link-238', 'STMWindowApplet', 'link-238');">STMWindowApplet</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L441"></a><tt class="py-lineno">441</tt>  <tt class="py-line">                    <tt class="py-keyword">if</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">win</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L442"></a><tt class="py-lineno">442</tt>  <tt class="py-line">                        <tt class="py-name">w</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">win</tt> </tt>
<a name="L443"></a><tt class="py-lineno">443</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">w</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L444"></a><tt class="py-lineno">444</tt>  <tt class="py-line">                            <tt class="py-name">l</tt><tt class="py-op">.</tt><tt id="link-239" class="py-name" targets="Method p4vasp.Structure.AtomInfo.append()=p4vasp.Structure.AtomInfo-class.html#append,Method p4vasp.Structure.Structure.append()=p4vasp.Structure.Structure-class.html#append,Method p4vasp.cStructure.AtomInfo.append()=p4vasp.cStructure.AtomInfo-class.html#append,Method p4vasp.cStructure.Structure.append()=p4vasp.cStructure.Structure-class.html#append,Method p4vasp.graph.Graph.append()=p4vasp.graph.Graph-class.html#append,Method p4vasp.graph.World.append()=p4vasp.graph.World-class.html#append,Method p4vasp.repository.Repository.append()=p4vasp.repository.Repository-class.html#append"><a title="p4vasp.Structure.AtomInfo.append
p4vasp.Structure.Structure.append
p4vasp.cStructure.AtomInfo.append
p4vasp.cStructure.Structure.append
p4vasp.graph.Graph.append
p4vasp.graph.World.append
p4vasp.repository.Repository.append" class="py-name" href="#" onclick="return doclink('link-239', 'append', 'link-239');">append</a></tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">x</tt><tt class="py-op">,</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">y</tt><tt class="py-op">,</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">w</tt><tt class="py-op">,</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">h</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L445"></a><tt class="py-lineno">445</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">isinstance</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt id="link-240" class="py-name"><a title="p4vasp.applet.StructureWindowApplet
p4vasp.applet.StructureWindowApplet.StructureWindowApplet" class="py-name" href="#" onclick="return doclink('link-240', 'StructureWindowApplet', 'link-9');">StructureWindowApplet</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L446"></a><tt class="py-lineno">446</tt>  <tt class="py-line">                    <tt class="py-keyword">if</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-241" class="py-name" targets="Method p4vasp.applet.ExportApplet.ExportApplet.swin()=p4vasp.applet.ExportApplet.ExportApplet-class.html#swin,Method p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.swin()=p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet-class.html#swin,Method p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.swin()=p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet-class.html#swin,Method p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.swin()=p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet-class.html#swin"><a title="p4vasp.applet.ExportApplet.ExportApplet.swin
p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.swin
p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.swin
p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.swin" class="py-name" href="#" onclick="return doclink('link-241', 'swin', 'link-241');">swin</a></tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L447"></a><tt class="py-lineno">447</tt>  <tt class="py-line">                        <tt class="py-name">w</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-242" class="py-name"><a title="p4vasp.applet.ExportApplet.ExportApplet.swin
p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.swin
p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.swin
p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.swin" class="py-name" href="#" onclick="return doclink('link-242', 'swin', 'link-241');">swin</a></tt><tt class="py-op">.</tt><tt class="py-name">win</tt> </tt>
<a name="L448"></a><tt class="py-lineno">448</tt>  <tt class="py-line">                        <tt class="py-keyword">if</tt> <tt class="py-name">w</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L449"></a><tt class="py-lineno">449</tt>  <tt class="py-line">                            <tt class="py-name">l</tt><tt class="py-op">.</tt><tt id="link-243" class="py-name"><a title="p4vasp.Structure.AtomInfo.append
p4vasp.Structure.Structure.append
p4vasp.cStructure.AtomInfo.append
p4vasp.cStructure.Structure.append
p4vasp.graph.Graph.append
p4vasp.graph.World.append
p4vasp.repository.Repository.append" class="py-name" href="#" onclick="return doclink('link-243', 'append', 'link-239');">append</a></tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">x</tt><tt class="py-op">,</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">y</tt><tt class="py-op">,</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">w</tt><tt class="py-op">,</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">h</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L450"></a><tt class="py-lineno">450</tt>  <tt class="py-line">            <tt class="py-name">xx</tt><tt class="py-op">=</tt><tt class="py-name">max</tt><tt class="py-op">(</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-keyword">lambda</tt> <tt class="py-name">x</tt><tt class="py-op">:</tt><tt class="py-name">x</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">x</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">l</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L451"></a><tt class="py-lineno">451</tt>  <tt class="py-line">            <tt class="py-name">yy</tt><tt class="py-op">=</tt><tt class="py-name">max</tt><tt class="py-op">(</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-keyword">lambda</tt> <tt class="py-name">x</tt><tt class="py-op">:</tt><tt class="py-name">x</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-name">x</tt><tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">l</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L452"></a><tt class="py-lineno">452</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">yy</tt><tt class="py-op">&lt;=</tt><tt class="py-number">600</tt><tt class="py-op">:</tt> </tt>
<a name="L453"></a><tt class="py-lineno">453</tt>  <tt class="py-line">                <tt class="py-name">xx</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L454"></a><tt class="py-lineno">454</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L455"></a><tt class="py-lineno">455</tt>  <tt class="py-line">                <tt class="py-name">yy</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L456"></a><tt class="py-lineno">456</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">win</tt>                 <tt class="py-op">=</tt> <tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">VisWindow</tt><tt class="py-op">(</tt><tt class="py-name">xx</tt><tt class="py-op">,</tt><tt class="py-name">yy</tt><tt class="py-op">,</tt><tt class="py-number">500</tt><tt class="py-op">,</tt><tt class="py-number">400</tt><tt class="py-op">,</tt><tt class="py-string">"p4vasp STM"</tt><tt class="py-op">)</tt> </tt>
<a name="L457"></a><tt class="py-lineno">457</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">navigator</tt>           <tt class="py-op">=</tt> <tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">VisNavDrawer</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L458"></a><tt class="py-lineno">458</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt>    <tt class="py-op">=</tt> <tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">VisStructureDrawer</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L459"></a><tt class="py-lineno">459</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-244" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-244', 'sd', 'link-51');">sd</a></tt>                  <tt class="py-op">=</tt> <tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">VisSlideDrawer</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L460"></a><tt class="py-lineno">460</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-245" class="py-name"><a title="p4vasp.applet.STMWindowApplet.STMWindowApplet.setClamp" class="py-name" href="#" onclick="return doclink('link-245', 'setClamp', 'link-235');">setClamp</a></tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">)</tt> </tt>
<a name="L461"></a><tt class="py-lineno">461</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">grad</tt><tt class="py-op">=</tt><tt class="py-name">cp4vasp</tt><tt class="py-op">.</tt><tt class="py-name">GrayColorGradient</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L462"></a><tt class="py-lineno">462</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">grad</tt><tt class="py-op">.</tt><tt class="py-name">thisown</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L463"></a><tt class="py-lineno">463</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-246" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-246', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">setGradient</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">grad</tt><tt class="py-op">)</tt> </tt>
<a name="L464"></a><tt class="py-lineno">464</tt>  <tt class="py-line">            <tt class="py-name">b1</tt><tt class="py-op">=</tt><tt id="link-247" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-247', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-248" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-248', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt> </tt>
<a name="L465"></a><tt class="py-lineno">465</tt>  <tt class="py-line">            <tt class="py-name">b2</tt><tt class="py-op">=</tt><tt id="link-249" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-249', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-250" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-250', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt> </tt>
<a name="L466"></a><tt class="py-lineno">466</tt>  <tt class="py-line">            <tt class="py-name">orig</tt><tt class="py-op">=</tt><tt id="link-251" class="py-name"><a title="p4vasp.cmatrix" class="py-name" href="#" onclick="return doclink('link-251', 'cmatrix', 'link-19');">cmatrix</a></tt><tt class="py-op">.</tt><tt id="link-252" class="py-name"><a title="p4vasp.cmatrix.Vector
p4vasp.matrix.Vector" class="py-name" href="#" onclick="return doclink('link-252', 'Vector', 'link-55');">Vector</a></tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt> </tt>
<a name="L467"></a><tt class="py-lineno">467</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-253" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-253', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">setB1</tt><tt class="py-op">(</tt><tt class="py-name">b1</tt><tt class="py-op">.</tt><tt class="py-name">pointer</tt><tt class="py-op">)</tt> </tt>
<a name="L468"></a><tt class="py-lineno">468</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-254" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-254', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">setB2</tt><tt class="py-op">(</tt><tt class="py-name">b2</tt><tt class="py-op">.</tt><tt class="py-name">pointer</tt><tt class="py-op">)</tt> </tt>
<a name="L469"></a><tt class="py-lineno">469</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-255" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-255', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">setOrigin</tt><tt class="py-op">(</tt><tt class="py-name">orig</tt><tt class="py-op">.</tt><tt class="py-name">pointer</tt><tt class="py-op">)</tt> </tt>
<a name="L470"></a><tt class="py-lineno">470</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-256" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-256', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt id="link-257" class="py-name"><a title="p4vasp.Structure.Structure.scale" class="py-name" href="#" onclick="return doclink('link-257', 'scale', 'link-206');">scale</a></tt><tt class="py-op">=</tt><tt class="py-number">10</tt> </tt>
<a name="L471"></a><tt class="py-lineno">471</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-258" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-258', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">n1</tt><tt class="py-op">=</tt><tt class="py-number">1</tt> </tt>
<a name="L472"></a><tt class="py-lineno">472</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-259" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-259', 'sd', 'link-51');">sd</a></tt><tt class="py-op">.</tt><tt class="py-name">n2</tt><tt class="py-op">=</tt><tt class="py-number">1</tt> </tt>
<a name="L473"></a><tt class="py-lineno">473</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">navigator</tt><tt class="py-op">.</tt><tt id="link-260" class="py-name"><a title="p4vasp.Structure.AtomInfo.append
p4vasp.Structure.Structure.append
p4vasp.cStructure.AtomInfo.append
p4vasp.cStructure.Structure.append
p4vasp.graph.Graph.append
p4vasp.graph.World.append
p4vasp.repository.Repository.append" class="py-name" href="#" onclick="return doclink('link-260', 'append', 'link-239');">append</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-261" class="py-name"><a title="p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.sd" class="py-name" href="#" onclick="return doclink('link-261', 'sd', 'link-51');">sd</a></tt><tt class="py-op">)</tt> </tt>
<a name="L474"></a><tt class="py-lineno">474</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">navigator</tt><tt class="py-op">.</tt><tt id="link-262" class="py-name"><a title="p4vasp.Structure.AtomInfo.append
p4vasp.Structure.Structure.append
p4vasp.cStructure.AtomInfo.append
p4vasp.cStructure.Structure.append
p4vasp.graph.Graph.append
p4vasp.graph.World.append
p4vasp.repository.Repository.append" class="py-name" href="#" onclick="return doclink('link-262', 'append', 'link-239');">append</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">)</tt> </tt>
<a name="L475"></a><tt class="py-lineno">475</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">win</tt><tt class="py-op">.</tt><tt class="py-name">setDrawer</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">navigator</tt><tt class="py-op">)</tt> </tt>
<a name="L476"></a><tt class="py-lineno">476</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-263" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.setRadiusFactor()=p4vasp.StructureWindow.StructureWindow-class.html#setRadiusFactor,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.setRadiusFactor()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setRadiusFactor"><a title="p4vasp.StructureWindow.StructureWindow.setRadiusFactor
p4vasp.applet.STMWindowApplet.STMWindowApplet.setRadiusFactor" class="py-name" href="#" onclick="return doclink('link-263', 'setRadiusFactor', 'link-263');">setRadiusFactor</a></tt><tt class="py-op">(</tt><tt class="py-number">0.5</tt><tt class="py-op">)</tt> </tt>
</div><a name="L477"></a><tt class="py-lineno">477</tt>  <tt class="py-line"> </tt>
<a name="L478"></a><tt class="py-lineno">478</tt>  <tt class="py-line"><tt class="py-comment">#    self.win.show()</tt> </tt>
<a name="L479"></a><tt class="py-lineno">479</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.setCellColor"></a><div id="STMWindowApplet.setCellColor-def"><a name="L480"></a><tt class="py-lineno">480</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setCellColor-toggle" onclick="return toggle('STMWindowApplet.setCellColor');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setCellColor">setCellColor</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">r</tt><tt class="py-op">,</tt><tt class="py-param">g</tt><tt class="py-op">,</tt><tt class="py-param">b</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setCellColor-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setCellColor-expanded"><a name="L481"></a><tt class="py-lineno">481</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-264" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.setCellColor()=p4vasp.StructureWindow.StructureWindow-class.html#setCellColor,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.setCellColor()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setCellColor"><a title="p4vasp.StructureWindow.StructureWindow.setCellColor
p4vasp.applet.STMWindowApplet.STMWindowApplet.setCellColor" class="py-name" href="#" onclick="return doclink('link-264', 'setCellColor', 'link-264');">setCellColor</a></tt><tt class="py-op">(</tt><tt class="py-name">r</tt><tt class="py-op">,</tt><tt class="py-name">g</tt><tt class="py-op">,</tt><tt class="py-name">b</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.setBackground"></a><div id="STMWindowApplet.setBackground-def"><a name="L482"></a><tt class="py-lineno">482</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setBackground-toggle" onclick="return toggle('STMWindowApplet.setBackground');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setBackground">setBackground</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">r</tt><tt class="py-op">,</tt><tt class="py-param">g</tt><tt class="py-op">,</tt><tt class="py-param">b</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setBackground-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setBackground-expanded"><a name="L483"></a><tt class="py-lineno">483</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">navigator</tt><tt class="py-op">.</tt><tt id="link-265" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.setBackground()=p4vasp.StructureWindow.StructureWindow-class.html#setBackground,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.setBackground()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setBackground"><a title="p4vasp.StructureWindow.StructureWindow.setBackground
p4vasp.applet.STMWindowApplet.STMWindowApplet.setBackground" class="py-name" href="#" onclick="return doclink('link-265', 'setBackground', 'link-265');">setBackground</a></tt><tt class="py-op">(</tt><tt class="py-name">r</tt><tt class="py-op">,</tt><tt class="py-name">g</tt><tt class="py-op">,</tt><tt class="py-name">b</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.getBackground"></a><div id="STMWindowApplet.getBackground-def"><a name="L484"></a><tt class="py-lineno">484</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getBackground-toggle" onclick="return toggle('STMWindowApplet.getBackground');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getBackground">getBackground</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getBackground-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getBackground-expanded"><a name="L485"></a><tt class="py-lineno">485</tt>  <tt class="py-line">        <tt id="link-266" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-266', 'n', 'link-50');">n</a></tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">navigator</tt> </tt>
<a name="L486"></a><tt class="py-lineno">486</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt id="link-267" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-267', 'n', 'link-50');">n</a></tt><tt class="py-op">.</tt><tt class="py-name">bg_red</tt><tt class="py-op">,</tt><tt id="link-268" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-268', 'n', 'link-50');">n</a></tt><tt class="py-op">.</tt><tt class="py-name">bg_green</tt><tt class="py-op">,</tt><tt id="link-269" class="py-name"><a title="p4vasp.cmatrix.Matrix.n
p4vasp.paint3d.OpenGLPaint3D.BasicOpenGLPaint3D.n" class="py-name" href="#" onclick="return doclink('link-269', 'n', 'link-50');">n</a></tt><tt class="py-op">.</tt><tt class="py-name">bg_blue</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.setIsosurfaceLevel"></a><div id="STMWindowApplet.setIsosurfaceLevel-def"><a name="L487"></a><tt class="py-lineno">487</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setIsosurfaceLevel-toggle" onclick="return toggle('STMWindowApplet.setIsosurfaceLevel');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setIsosurfaceLevel">setIsosurfaceLevel</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">l</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setIsosurfaceLevel-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setIsosurfaceLevel-expanded"><a name="L488"></a><tt class="py-lineno">488</tt>  <tt class="py-line">        <tt id="link-270" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-270', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-271" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-271', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'setIsosurfaceLevel' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.getIsosurfaceLevel"></a><div id="STMWindowApplet.getIsosurfaceLevel-def"><a name="L489"></a><tt class="py-lineno">489</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getIsosurfaceLevel-toggle" onclick="return toggle('STMWindowApplet.getIsosurfaceLevel');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getIsosurfaceLevel">getIsosurfaceLevel</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getIsosurfaceLevel-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getIsosurfaceLevel-expanded"><a name="L490"></a><tt class="py-lineno">490</tt>  <tt class="py-line">        <tt id="link-272" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-272', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-273" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-273', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'getIsosurfaceLevel' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.setChgcar"></a><div id="STMWindowApplet.setChgcar-def"><a name="L491"></a><tt class="py-lineno">491</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setChgcar-toggle" onclick="return toggle('STMWindowApplet.setChgcar');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setChgcar">setChgcar</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">c</tt><tt class="py-op">,</tt><tt class="py-param">update_structure</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setChgcar-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setChgcar-expanded"><a name="L492"></a><tt class="py-lineno">492</tt>  <tt class="py-line">        <tt id="link-274" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-274', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-275" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-275', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'setChgcar' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.getArrowsScale"></a><div id="STMWindowApplet.getArrowsScale-def"><a name="L493"></a><tt class="py-lineno">493</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getArrowsScale-toggle" onclick="return toggle('STMWindowApplet.getArrowsScale');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getArrowsScale">getArrowsScale</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getArrowsScale-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getArrowsScale-expanded"><a name="L494"></a><tt class="py-lineno">494</tt>  <tt class="py-line">        <tt id="link-276" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-276', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-277" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-277', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'getArrowsScale' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.setArrowsScale"></a><div id="STMWindowApplet.setArrowsScale-def"><a name="L495"></a><tt class="py-lineno">495</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setArrowsScale-toggle" onclick="return toggle('STMWindowApplet.setArrowsScale');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setArrowsScale">setArrowsScale</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">s</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setArrowsScale-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setArrowsScale-expanded"><a name="L496"></a><tt class="py-lineno">496</tt>  <tt class="py-line">        <tt id="link-278" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-278', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-279" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-279', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'setArrowsScale' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.getRadiusFactor"></a><div id="STMWindowApplet.getRadiusFactor-def"><a name="L497"></a><tt class="py-lineno">497</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getRadiusFactor-toggle" onclick="return toggle('STMWindowApplet.getRadiusFactor');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getRadiusFactor">getRadiusFactor</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getRadiusFactor-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getRadiusFactor-expanded"><a name="L498"></a><tt class="py-lineno">498</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-280" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.getRadiusFactor()=p4vasp.StructureWindow.StructureWindow-class.html#getRadiusFactor,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.getRadiusFactor()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getRadiusFactor"><a title="p4vasp.StructureWindow.StructureWindow.getRadiusFactor
p4vasp.applet.STMWindowApplet.STMWindowApplet.getRadiusFactor" class="py-name" href="#" onclick="return doclink('link-280', 'getRadiusFactor', 'link-280');">getRadiusFactor</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.setRadiusFactor"></a><div id="STMWindowApplet.setRadiusFactor-def"><a name="L499"></a><tt class="py-lineno">499</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setRadiusFactor-toggle" onclick="return toggle('STMWindowApplet.setRadiusFactor');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setRadiusFactor">setRadiusFactor</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">s</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setRadiusFactor-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setRadiusFactor-expanded"><a name="L500"></a><tt class="py-lineno">500</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-281" class="py-name"><a title="p4vasp.StructureWindow.StructureWindow.setRadiusFactor
p4vasp.applet.STMWindowApplet.STMWindowApplet.setRadiusFactor" class="py-name" href="#" onclick="return doclink('link-281', 'setRadiusFactor', 'link-263');">setRadiusFactor</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.showCell"></a><div id="STMWindowApplet.showCell-def"><a name="L501"></a><tt class="py-lineno">501</tt> <a class="py-toggle" href="#" id="STMWindowApplet.showCell-toggle" onclick="return toggle('STMWindowApplet.showCell');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#showCell">showCell</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">s</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.showCell-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.showCell-expanded"><a name="L502"></a><tt class="py-lineno">502</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-282" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.showCell()=p4vasp.StructureWindow.StructureWindow-class.html#showCell,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.showCell()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#showCell"><a title="p4vasp.StructureWindow.StructureWindow.showCell
p4vasp.applet.STMWindowApplet.STMWindowApplet.showCell" class="py-name" href="#" onclick="return doclink('link-282', 'showCell', 'link-282');">showCell</a></tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.setIndex"></a><div id="STMWindowApplet.setIndex-def"><a name="L503"></a><tt class="py-lineno">503</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setIndex-toggle" onclick="return toggle('STMWindowApplet.setIndex');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setIndex">setIndex</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">index</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setIndex-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setIndex-expanded"><a name="L504"></a><tt class="py-lineno">504</tt>  <tt class="py-line">        <tt id="link-283" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-283', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-284" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-284', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'setIndex' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
<a name="L505"></a><tt class="py-lineno">505</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">index</tt><tt class="py-op">=</tt><tt class="py-name">index</tt> </tt>
</div><a name="L506"></a><tt class="py-lineno">506</tt>  <tt class="py-line"><tt class="py-comment">#    self.updateSeq()</tt> </tt>
<a name="STMWindowApplet.setSequenceType"></a><div id="STMWindowApplet.setSequenceType-def"><a name="L507"></a><tt class="py-lineno">507</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setSequenceType-toggle" onclick="return toggle('STMWindowApplet.setSequenceType');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setSequenceType">setSequenceType</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">seqtype</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setSequenceType-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setSequenceType-expanded"><a name="L508"></a><tt class="py-lineno">508</tt>  <tt class="py-line">        <tt id="link-285" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-285', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-286" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-286', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'setSequenceType' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
<a name="L509"></a><tt class="py-lineno">509</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">sequencetype</tt><tt class="py-op">=</tt><tt class="py-name">seqtype</tt> </tt>
</div><a name="L510"></a><tt class="py-lineno">510</tt>  <tt class="py-line"><tt class="py-comment">#    self.updateSeq()</tt> </tt>
<a name="STMWindowApplet.setArrowsType"></a><div id="STMWindowApplet.setArrowsType-def"><a name="L511"></a><tt class="py-lineno">511</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setArrowsType-toggle" onclick="return toggle('STMWindowApplet.setArrowsType');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setArrowsType">setArrowsType</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">atype</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setArrowsType-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setArrowsType-expanded"><a name="L512"></a><tt class="py-lineno">512</tt>  <tt class="py-line">        <tt id="link-287" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-287', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-288" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-288', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'setArrowsType' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
<a name="L513"></a><tt class="py-lineno">513</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">arrowstype</tt><tt class="py-op">=</tt><tt class="py-name">atype</tt> </tt>
</div><a name="L514"></a><tt class="py-lineno">514</tt>  <tt class="py-line"><tt class="py-comment">#    self.updateSeq()</tt> </tt>
<a name="STMWindowApplet.updateSeq"></a><div id="STMWindowApplet.updateSeq-def"><a name="L515"></a><tt class="py-lineno">515</tt> <a class="py-toggle" href="#" id="STMWindowApplet.updateSeq-toggle" onclick="return toggle('STMWindowApplet.updateSeq');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateSeq">updateSeq</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.updateSeq-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.updateSeq-expanded"><a name="L516"></a><tt class="py-lineno">516</tt>  <tt class="py-line">        <tt id="link-289" class="py-name"><a title="p4vasp.msg" class="py-name" href="#" onclick="return doclink('link-289', 'msg', 'link-118');">msg</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-290" class="py-name"><a title="p4vasp.message.MessageDriver.status
p4vasp.schedule'.Process.status" class="py-name" href="#" onclick="return doclink('link-290', 'status', 'link-139');">status</a></tt><tt class="py-op">(</tt><tt class="py-string">"Function 'updateSeq' not implemented in the STM window."</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.setMultiple"></a><div id="STMWindowApplet.setMultiple-def"><a name="L517"></a><tt class="py-lineno">517</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setMultiple-toggle" onclick="return toggle('STMWindowApplet.setMultiple');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setMultiple">setMultiple</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">a</tt><tt class="py-op">,</tt><tt class="py-param">b</tt><tt class="py-op">,</tt><tt class="py-param">c</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setMultiple-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setMultiple-expanded"><a name="L518"></a><tt class="py-lineno">518</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">multiple</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-name">b</tt><tt class="py-op">,</tt><tt id="link-291" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-291', 'c', 'link-68');">c</a></tt><tt class="py-op">)</tt> </tt>
<a name="L519"></a><tt class="py-lineno">519</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-292" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.setMultiple()=p4vasp.StructureWindow.StructureWindow-class.html#setMultiple,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.setMultiple()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setMultiple"><a title="p4vasp.StructureWindow.StructureWindow.setMultiple
p4vasp.applet.STMWindowApplet.STMWindowApplet.setMultiple" class="py-name" href="#" onclick="return doclink('link-292', 'setMultiple', 'link-292');">setMultiple</a></tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">b</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt id="link-293" class="py-name"><a title="p4vasp.SystemPM.c" class="py-name" href="#" onclick="return doclink('link-293', 'c', 'link-68');">c</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.getMultiple"></a><div id="STMWindowApplet.getMultiple-def"><a name="L520"></a><tt class="py-lineno">520</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getMultiple-toggle" onclick="return toggle('STMWindowApplet.getMultiple');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getMultiple">getMultiple</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getMultiple-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getMultiple-expanded"><a name="L521"></a><tt class="py-lineno">521</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">multiple</tt> </tt>
</div><a name="L522"></a><tt class="py-lineno">522</tt>  <tt class="py-line"> </tt>
<a name="L523"></a><tt class="py-lineno">523</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.setStructure"></a><div id="STMWindowApplet.setStructure-def"><a name="L524"></a><tt class="py-lineno">524</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setStructure-toggle" onclick="return toggle('STMWindowApplet.setStructure');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setStructure">setStructure</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">structure</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setStructure-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setStructure-expanded"><a name="L525"></a><tt class="py-lineno">525</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">vstructure</tt><tt class="py-op">=</tt><tt class="py-name">structure</tt> </tt>
<a name="L526"></a><tt class="py-lineno">526</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">structure</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-keyword">not</tt> <tt id="link-294" class="py-name" targets="Method p4vasp.cStructure.Structure.len()=p4vasp.cStructure.Structure-class.html#len"><a title="p4vasp.cStructure.Structure.len" class="py-name" href="#" onclick="return doclink('link-294', 'len', 'link-294');">len</a></tt><tt class="py-op">(</tt><tt class="py-name">structure</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L527"></a><tt class="py-lineno">527</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-295" class="py-name"><a title="p4vasp.Structure.Structure.setStructure
p4vasp.StructureWindow.StructureWindow.setStructure
p4vasp.applet.BuilderApplet.StructureTreeModel.setStructure
p4vasp.applet.STMWindowApplet.STMWindowApplet.setStructure
p4vasp.applet.StructureApplet.StructureApplet.setStructure
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.setStructure
p4vasp.cStructure.Structure.setStructure" class="py-name" href="#" onclick="return doclink('link-295', 'setStructure', 'link-80');">setStructure</a></tt><tt class="py-op">(</tt><tt class="py-name">None</tt><tt class="py-op">)</tt> </tt>
<a name="L528"></a><tt class="py-lineno">528</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L529"></a><tt class="py-lineno">529</tt>  <tt class="py-line">            <tt class="py-name">structure</tt><tt class="py-op">=</tt><tt id="link-296" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-296', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-297" class="py-name"><a title="p4vasp.cStructure" class="py-name" href="#" onclick="return doclink('link-297', 'cStructure', 'link-17');">cStructure</a></tt><tt class="py-op">.</tt><tt id="link-298" class="py-name"><a title="p4vasp.Structure
p4vasp.Structure.Structure
p4vasp.cStructure.Structure" class="py-name" href="#" onclick="return doclink('link-298', 'Structure', 'link-15');">Structure</a></tt><tt class="py-op">(</tt><tt class="py-name">structure</tt><tt class="py-op">)</tt> </tt>
<a name="L530"></a><tt class="py-lineno">530</tt>  <tt class="py-line">            <tt class="py-name">structure</tt><tt class="py-op">.</tt><tt id="link-299" class="py-name" targets="Method p4vasp.Structure.Structure.correctScaling()=p4vasp.Structure.Structure-class.html#correctScaling,Method p4vasp.cStructure.Structure.correctScaling()=p4vasp.cStructure.Structure-class.html#correctScaling"><a title="p4vasp.Structure.Structure.correctScaling
p4vasp.cStructure.Structure.correctScaling" class="py-name" href="#" onclick="return doclink('link-299', 'correctScaling', 'link-299');">correctScaling</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L531"></a><tt class="py-lineno">531</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">atomtypes</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L532"></a><tt class="py-lineno">532</tt>  <tt class="py-line">                <tt class="py-name">structure</tt><tt class="py-op">.</tt><tt class="py-name">info</tt><tt class="py-op">.</tt><tt id="link-300" class="py-name" targets="Method p4vasp.Structure.AtomInfo.fillAttributesWithTable()=p4vasp.Structure.AtomInfo-class.html#fillAttributesWithTable,Method p4vasp.Structure.AtomtypesArray.fillAttributesWithTable()=p4vasp.Structure.AtomtypesArray-class.html#fillAttributesWithTable,Method p4vasp.cStructure.AtomInfo.fillAttributesWithTable()=p4vasp.cStructure.AtomInfo-class.html#fillAttributesWithTable"><a title="p4vasp.Structure.AtomInfo.fillAttributesWithTable
p4vasp.Structure.AtomtypesArray.fillAttributesWithTable
p4vasp.cStructure.AtomInfo.fillAttributesWithTable" class="py-name" href="#" onclick="return doclink('link-300', 'fillAttributesWithTable', 'link-300');">fillAttributesWithTable</a></tt><tt class="py-op">(</tt><tt id="link-301" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-301', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-302" class="py-name"><a title="p4vasp.cStructure" class="py-name" href="#" onclick="return doclink('link-302', 'cStructure', 'link-17');">cStructure</a></tt><tt class="py-op">.</tt><tt id="link-303" class="py-name" targets="Class p4vasp.Structure.AtomInfo=p4vasp.Structure.AtomInfo-class.html,Class p4vasp.cStructure.AtomInfo=p4vasp.cStructure.AtomInfo-class.html"><a title="p4vasp.Structure.AtomInfo
p4vasp.cStructure.AtomInfo" class="py-name" href="#" onclick="return doclink('link-303', 'AtomInfo', 'link-303');">AtomInfo</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">atomtypes</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L533"></a><tt class="py-lineno">533</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-304" class="py-name"><a title="p4vasp.Structure.Structure.setStructure
p4vasp.StructureWindow.StructureWindow.setStructure
p4vasp.applet.BuilderApplet.StructureTreeModel.setStructure
p4vasp.applet.STMWindowApplet.STMWindowApplet.setStructure
p4vasp.applet.StructureApplet.StructureApplet.setStructure
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.setStructure
p4vasp.cStructure.Structure.setStructure" class="py-name" href="#" onclick="return doclink('link-304', 'setStructure', 'link-80');">setStructure</a></tt><tt class="py-op">(</tt><tt class="py-name">structure</tt><tt class="py-op">.</tt><tt class="py-name">this</tt><tt class="py-op">)</tt> </tt>
<a name="L534"></a><tt class="py-lineno">534</tt>  <tt class="py-line">            <tt class="py-name">info</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt class="py-name">info</tt> </tt>
<a name="L535"></a><tt class="py-lineno">535</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt id="link-305" class="py-name" targets="Variable p4vasp.paint3d.OpenGLPaint3D.i=p4vasp.paint3d.OpenGLPaint3D-module.html#i"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-305', 'i', 'link-305');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">range</tt><tt class="py-op">(</tt><tt class="py-name">info</tt><tt class="py-op">.</tt><tt id="link-306" class="py-name"><a title="p4vasp.cStructure.Structure.len" class="py-name" href="#" onclick="return doclink('link-306', 'len', 'link-294');">len</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L536"></a><tt class="py-lineno">536</tt>  <tt class="py-line">                <tt class="py-name">info</tt><tt class="py-op">.</tt><tt id="link-307" class="py-name" targets="Method p4vasp.Array.Array.getRecord()=p4vasp.Array.Array-class.html#getRecord,Method p4vasp.Array.ArrayRecord.getRecord()=p4vasp.Array.ArrayRecord-class.html#getRecord,Method p4vasp.Structure.AtomInfo.getRecord()=p4vasp.Structure.AtomInfo-class.html#getRecord,Method p4vasp.Structure.AtomtypesArray.getRecord()=p4vasp.Structure.AtomtypesArray-class.html#getRecord,Method p4vasp.Structure.Structure.getRecord()=p4vasp.Structure.Structure-class.html#getRecord,Method p4vasp.cStructure.AtomInfo.getRecord()=p4vasp.cStructure.AtomInfo-class.html#getRecord,Method p4vasp.cStructure.Structure.getRecord()=p4vasp.cStructure.Structure-class.html#getRecord"><a title="p4vasp.Array.Array.getRecord
p4vasp.Array.ArrayRecord.getRecord
p4vasp.Structure.AtomInfo.getRecord
p4vasp.Structure.AtomtypesArray.getRecord
p4vasp.Structure.Structure.getRecord
p4vasp.cStructure.AtomInfo.getRecord
p4vasp.cStructure.Structure.getRecord" class="py-name" href="#" onclick="return doclink('link-307', 'getRecord', 'link-307');">getRecord</a></tt><tt class="py-op">(</tt><tt id="link-308" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-308', 'i', 'link-305');">i</a></tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">hidden</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L537"></a><tt class="py-lineno">537</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt id="link-309" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-309', 'i', 'link-305');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hide_atoms</tt><tt class="py-op">:</tt> </tt>
<a name="L538"></a><tt class="py-lineno">538</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt id="link-310" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-310', 'i', 'link-305');">i</a></tt><tt class="py-op">&gt;=</tt><tt class="py-number">0</tt> <tt class="py-keyword">and</tt> <tt id="link-311" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-311', 'i', 'link-305');">i</a></tt><tt class="py-op">&lt;</tt><tt id="link-312" class="py-name"><a title="p4vasp.cStructure.Structure.len" class="py-name" href="#" onclick="return doclink('link-312', 'len', 'link-294');">len</a></tt><tt class="py-op">(</tt><tt class="py-name">structure</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L539"></a><tt class="py-lineno">539</tt>  <tt class="py-line">                    <tt class="py-name">info</tt><tt class="py-op">.</tt><tt id="link-313" class="py-name"><a title="p4vasp.Array.Array.getRecord
p4vasp.Array.ArrayRecord.getRecord
p4vasp.Structure.AtomInfo.getRecord
p4vasp.Structure.AtomtypesArray.getRecord
p4vasp.Structure.Structure.getRecord
p4vasp.cStructure.AtomInfo.getRecord
p4vasp.cStructure.Structure.getRecord" class="py-name" href="#" onclick="return doclink('link-313', 'getRecord', 'link-307');">getRecord</a></tt><tt class="py-op">(</tt><tt id="link-314" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-314', 'i', 'link-305');">i</a></tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">hidden</tt><tt class="py-op">=</tt><tt class="py-number">1</tt> </tt>
<a name="L540"></a><tt class="py-lineno">540</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">vstructure</tt><tt class="py-op">=</tt><tt class="py-name">structure</tt> </tt>
</div><a name="L541"></a><tt class="py-lineno">541</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.updateStructure"></a><div id="STMWindowApplet.updateStructure-def"><a name="L542"></a><tt class="py-lineno">542</tt> <a class="py-toggle" href="#" id="STMWindowApplet.updateStructure-toggle" onclick="return toggle('STMWindowApplet.updateStructure');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateStructure">updateStructure</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.updateStructure-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.updateStructure-expanded"><a name="L543"></a><tt class="py-lineno">543</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">visible</tt><tt class="py-op">:</tt> </tt>
<a name="L544"></a><tt class="py-lineno">544</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-315" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.updateStructure()=p4vasp.StructureWindow.StructureWindow-class.html#updateStructure,Method p4vasp.applet.BuilderApplet.BuilderApplet.updateStructure()=p4vasp.applet.BuilderApplet.BuilderApplet-class.html#updateStructure,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.updateStructure()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#updateStructure"><a title="p4vasp.StructureWindow.StructureWindow.updateStructure
p4vasp.applet.BuilderApplet.BuilderApplet.updateStructure
p4vasp.applet.STMWindowApplet.STMWindowApplet.updateStructure" class="py-name" href="#" onclick="return doclink('link-315', 'updateStructure', 'link-315');">updateStructure</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.getHiddenAtoms"></a><div id="STMWindowApplet.getHiddenAtoms-def"><a name="L545"></a><tt class="py-lineno">545</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getHiddenAtoms-toggle" onclick="return toggle('STMWindowApplet.getHiddenAtoms');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getHiddenAtoms">getHiddenAtoms</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getHiddenAtoms-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getHiddenAtoms-expanded"><a name="L546"></a><tt class="py-lineno">546</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hide_atoms</tt> </tt>
</div><a name="STMWindowApplet.setHiddenAtoms"></a><div id="STMWindowApplet.setHiddenAtoms-def"><a name="L547"></a><tt class="py-lineno">547</tt> <a class="py-toggle" href="#" id="STMWindowApplet.setHiddenAtoms-toggle" onclick="return toggle('STMWindowApplet.setHiddenAtoms');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#setHiddenAtoms">setHiddenAtoms</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">l</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.setHiddenAtoms-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.setHiddenAtoms-expanded"><a name="L548"></a><tt class="py-lineno">548</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hide_atoms</tt><tt class="py-op">=</tt><tt class="py-name">l</tt> </tt>
<a name="L549"></a><tt class="py-lineno">549</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L550"></a><tt class="py-lineno">550</tt>  <tt class="py-line">            <tt class="py-name">info</tt><tt class="py-op">=</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt class="py-name">info</tt> </tt>
<a name="L551"></a><tt class="py-lineno">551</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt id="link-316" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-316', 'i', 'link-305');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">range</tt><tt class="py-op">(</tt><tt class="py-name">info</tt><tt class="py-op">.</tt><tt id="link-317" class="py-name"><a title="p4vasp.cStructure.Structure.len" class="py-name" href="#" onclick="return doclink('link-317', 'len', 'link-294');">len</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L552"></a><tt class="py-lineno">552</tt>  <tt class="py-line">                <tt class="py-name">info</tt><tt class="py-op">.</tt><tt id="link-318" class="py-name"><a title="p4vasp.Array.Array.getRecord
p4vasp.Array.ArrayRecord.getRecord
p4vasp.Structure.AtomInfo.getRecord
p4vasp.Structure.AtomtypesArray.getRecord
p4vasp.Structure.Structure.getRecord
p4vasp.cStructure.AtomInfo.getRecord
p4vasp.cStructure.Structure.getRecord" class="py-name" href="#" onclick="return doclink('link-318', 'getRecord', 'link-307');">getRecord</a></tt><tt class="py-op">(</tt><tt id="link-319" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-319', 'i', 'link-305');">i</a></tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">hidden</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L553"></a><tt class="py-lineno">553</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt id="link-320" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-320', 'i', 'link-305');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">hide_atoms</tt><tt class="py-op">:</tt> </tt>
<a name="L554"></a><tt class="py-lineno">554</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt id="link-321" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-321', 'i', 'link-305');">i</a></tt><tt class="py-op">&gt;=</tt><tt class="py-number">0</tt> <tt class="py-keyword">and</tt> <tt id="link-322" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-322', 'i', 'link-305');">i</a></tt><tt class="py-op">&lt;</tt><tt id="link-323" class="py-name"><a title="p4vasp.cStructure.Structure.len" class="py-name" href="#" onclick="return doclink('link-323', 'len', 'link-294');">len</a></tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L555"></a><tt class="py-lineno">555</tt>  <tt class="py-line">                    <tt class="py-name">info</tt><tt class="py-op">.</tt><tt id="link-324" class="py-name"><a title="p4vasp.Array.Array.getRecord
p4vasp.Array.ArrayRecord.getRecord
p4vasp.Structure.AtomInfo.getRecord
p4vasp.Structure.AtomtypesArray.getRecord
p4vasp.Structure.Structure.getRecord
p4vasp.cStructure.AtomInfo.getRecord
p4vasp.cStructure.Structure.getRecord" class="py-name" href="#" onclick="return doclink('link-324', 'getRecord', 'link-307');">getRecord</a></tt><tt class="py-op">(</tt><tt id="link-325" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-325', 'i', 'link-305');">i</a></tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">hidden</tt><tt class="py-op">=</tt><tt class="py-number">1</tt> </tt>
<a name="L556"></a><tt class="py-lineno">556</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-326" class="py-name"><a title="p4vasp.StructureWindow.StructureWindow.updateStructure
p4vasp.applet.BuilderApplet.BuilderApplet.updateStructure
p4vasp.applet.STMWindowApplet.STMWindowApplet.updateStructure" class="py-name" href="#" onclick="return doclink('link-326', 'updateStructure', 'link-315');">updateStructure</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.removeSelectedAll"></a><div id="STMWindowApplet.removeSelectedAll-def"><a name="L557"></a><tt class="py-lineno">557</tt> <a class="py-toggle" href="#" id="STMWindowApplet.removeSelectedAll-toggle" onclick="return toggle('STMWindowApplet.removeSelectedAll');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#removeSelectedAll">removeSelectedAll</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.removeSelectedAll-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.removeSelectedAll-expanded"><a name="L558"></a><tt class="py-lineno">558</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-327" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.removeSelectedAll()=p4vasp.StructureWindow.StructureWindow-class.html#removeSelectedAll,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.removeSelectedAll()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#removeSelectedAll"><a title="p4vasp.StructureWindow.StructureWindow.removeSelectedAll
p4vasp.applet.STMWindowApplet.STMWindowApplet.removeSelectedAll" class="py-name" href="#" onclick="return doclink('link-327', 'removeSelectedAll', 'link-327');">removeSelectedAll</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.selectAtom"></a><div id="STMWindowApplet.selectAtom-def"><a name="L559"></a><tt class="py-lineno">559</tt> <a class="py-toggle" href="#" id="STMWindowApplet.selectAtom-toggle" onclick="return toggle('STMWindowApplet.selectAtom');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#selectAtom">selectAtom</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">atom</tt><tt class="py-op">,</tt><tt class="py-param">nx</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-param">ny</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-param">nz</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.selectAtom-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.selectAtom-expanded"><a name="L560"></a><tt class="py-lineno">560</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-328" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.selectAtom()=p4vasp.StructureWindow.StructureWindow-class.html#selectAtom,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.selectAtom()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#selectAtom"><a title="p4vasp.StructureWindow.StructureWindow.selectAtom
p4vasp.applet.STMWindowApplet.STMWindowApplet.selectAtom" class="py-name" href="#" onclick="return doclink('link-328', 'selectAtom', 'link-328');">selectAtom</a></tt><tt class="py-op">(</tt><tt class="py-name">atom</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nz</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.deselectAtom"></a><div id="STMWindowApplet.deselectAtom-def"><a name="L561"></a><tt class="py-lineno">561</tt> <a class="py-toggle" href="#" id="STMWindowApplet.deselectAtom-toggle" onclick="return toggle('STMWindowApplet.deselectAtom');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#deselectAtom">deselectAtom</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">atom</tt><tt class="py-op">,</tt><tt class="py-param">nx</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-param">ny</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-param">nz</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.deselectAtom-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.deselectAtom-expanded"><a name="L562"></a><tt class="py-lineno">562</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-329" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.deselectAtom()=p4vasp.StructureWindow.StructureWindow-class.html#deselectAtom,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.deselectAtom()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#deselectAtom"><a title="p4vasp.StructureWindow.StructureWindow.deselectAtom
p4vasp.applet.STMWindowApplet.STMWindowApplet.deselectAtom" class="py-name" href="#" onclick="return doclink('link-329', 'deselectAtom', 'link-329');">deselectAtom</a></tt><tt class="py-op">(</tt><tt class="py-name">atom</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nz</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.getSelectedCount"></a><div id="STMWindowApplet.getSelectedCount-def"><a name="L563"></a><tt class="py-lineno">563</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getSelectedCount-toggle" onclick="return toggle('STMWindowApplet.getSelectedCount');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getSelectedCount">getSelectedCount</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getSelectedCount-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getSelectedCount-expanded"><a name="L564"></a><tt class="py-lineno">564</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-330" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.getSelectedCount()=p4vasp.StructureWindow.StructureWindow-class.html#getSelectedCount,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.getSelectedCount()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getSelectedCount"><a title="p4vasp.StructureWindow.StructureWindow.getSelectedCount
p4vasp.applet.STMWindowApplet.STMWindowApplet.getSelectedCount" class="py-name" href="#" onclick="return doclink('link-330', 'getSelectedCount', 'link-330');">getSelectedCount</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="STMWindowApplet.getSelected"></a><div id="STMWindowApplet.getSelected-def"><a name="L565"></a><tt class="py-lineno">565</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getSelected-toggle" onclick="return toggle('STMWindowApplet.getSelected');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getSelected">getSelected</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt><tt class="py-param">i</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getSelected-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getSelected-expanded"><a name="L566"></a><tt class="py-lineno">566</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">structure_drawer</tt><tt class="py-op">.</tt><tt id="link-331" class="py-name" targets="Method p4vasp.StructureWindow.StructureWindow.getSelected()=p4vasp.StructureWindow.StructureWindow-class.html#getSelected,Method p4vasp.applet.STMWindowApplet.STMWindowApplet.getSelected()=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getSelected"><a title="p4vasp.StructureWindow.StructureWindow.getSelected
p4vasp.applet.STMWindowApplet.STMWindowApplet.getSelected" class="py-name" href="#" onclick="return doclink('link-331', 'getSelected', 'link-331');">getSelected</a></tt><tt class="py-op">(</tt><tt id="link-332" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-332', 'i', 'link-305');">i</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L567"></a><tt class="py-lineno">567</tt>  <tt class="py-line"> </tt>
<a name="L568"></a><tt class="py-lineno">568</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.notifyAtomSelection"></a><div id="STMWindowApplet.notifyAtomSelection-def"><a name="L569"></a><tt class="py-lineno">569</tt> <a class="py-toggle" href="#" id="STMWindowApplet.notifyAtomSelection-toggle" onclick="return toggle('STMWindowApplet.notifyAtomSelection');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#notifyAtomSelection">notifyAtomSelection</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">sel</tt><tt class="py-op">,</tt><tt class="py-param">origin</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.notifyAtomSelection-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.notifyAtomSelection-expanded"><a name="L570"></a><tt class="py-lineno">570</tt>  <tt class="py-line"><tt class="py-comment">#    self.atom_selection.set_text(sel.encode(self.structure))</tt> </tt>
<a name="L571"></a><tt class="py-lineno">571</tt>  <tt class="py-line">        <tt class="py-name">sel</tt><tt class="py-op">=</tt><tt id="link-333" class="py-name"><a title="p4vasp" class="py-name" href="#" onclick="return doclink('link-333', 'p4vasp', 'link-0');">p4vasp</a></tt><tt class="py-op">.</tt><tt id="link-334" class="py-name"><a title="p4vasp.Selection
p4vasp.Selection.Selection" class="py-name" href="#" onclick="return doclink('link-334', 'Selection', 'link-22');">Selection</a></tt><tt class="py-op">.</tt><tt id="link-335" class="py-name" targets="Function p4vasp.Selection.selection()=p4vasp.Selection-module.html#selection"><a title="p4vasp.Selection.selection" class="py-name" href="#" onclick="return doclink('link-335', 'selection', 'link-335');">selection</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L572"></a><tt class="py-lineno">572</tt>  <tt class="py-line">        <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-336" class="py-name"><a title="p4vasp.StructureWindow.StructureWindow.removeSelectedAll
p4vasp.applet.STMWindowApplet.STMWindowApplet.removeSelectedAll" class="py-name" href="#" onclick="return doclink('link-336', 'removeSelectedAll', 'link-327');">removeSelectedAll</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L573"></a><tt class="py-lineno">573</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-337" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-337', 'i', 'link-305');">i</a></tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nz</tt> <tt class="py-keyword">in</tt> <tt class="py-name">sel</tt><tt class="py-op">:</tt> </tt>
<a name="L574"></a><tt class="py-lineno">574</tt>  <tt class="py-line">            <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-338" class="py-name"><a title="p4vasp.StructureWindow.StructureWindow.selectAtom
p4vasp.applet.STMWindowApplet.STMWindowApplet.selectAtom" class="py-name" href="#" onclick="return doclink('link-338', 'selectAtom', 'link-328');">selectAtom</a></tt><tt class="py-op">(</tt><tt id="link-339" class="py-name"><a title="p4vasp.paint3d.OpenGLPaint3D.i" class="py-name" href="#" onclick="return doclink('link-339', 'i', 'link-305');">i</a></tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nz</tt><tt class="py-op">)</tt> </tt>
</div><a name="L575"></a><tt class="py-lineno">575</tt>  <tt class="py-line"> </tt>
<a name="STMWindowApplet.getWindowPtr"></a><div id="STMWindowApplet.getWindowPtr-def"><a name="L576"></a><tt class="py-lineno">576</tt> <a class="py-toggle" href="#" id="STMWindowApplet.getWindowPtr-toggle" onclick="return toggle('STMWindowApplet.getWindowPtr');">-</a><tt class="py-line">    <tt class="py-keyword">def</tt> <a class="py-def-name" href="p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#getWindowPtr">getWindowPtr</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="STMWindowApplet.getWindowPtr-collapsed" style="display:none;" pad="+++" indent="++++++++"></div><div id="STMWindowApplet.getWindowPtr-expanded"><a name="L577"></a><tt class="py-lineno">577</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">win</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L578"></a><tt class="py-lineno">578</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">win</tt><tt class="py-op">.</tt><tt class="py-name">this</tt> </tt>
<a name="L579"></a><tt class="py-lineno">579</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">None</tt> </tt>
</div></div><a name="L580"></a><tt class="py-lineno">580</tt>  <tt class="py-line"> </tt>
<a name="L581"></a><tt class="py-lineno">581</tt>  <tt class="py-line"><tt id="link-340" class="py-name"><a title="p4vasp.applet.STMWindowApplet
p4vasp.applet.STMWindowApplet.STMWindowApplet" class="py-name" href="#" onclick="return doclink('link-340', 'STMWindowApplet', 'link-238');">STMWindowApplet</a></tt><tt class="py-op">.</tt><tt id="link-341" class="py-name" targets="Variable p4vasp.SystemPM.SystemRepository.store_profile=p4vasp.SystemPM.SystemRepository-class.html#store_profile,Variable p4vasp.applet.Applet.Applet.store_profile=p4vasp.applet.Applet.Applet-class.html#store_profile,Variable p4vasp.applet.AppletFactory.store_profile=p4vasp.applet.AppletFactory-class.html#store_profile,Variable p4vasp.applet.AppletRepository.store_profile=p4vasp.applet.AppletRepository-class.html#store_profile,Variable p4vasp.applet.BuilderApplet.BuilderApplet.store_profile=p4vasp.applet.BuilderApplet.BuilderApplet-class.html#store_profile,Variable p4vasp.applet.DielectricApplet.DielectricApplet.store_profile=p4vasp.applet.DielectricApplet.DielectricApplet-class.html#store_profile,Variable p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet.store_profile=p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet-class.html#store_profile,Variable p4vasp.applet.ElectronicApplet.ElectronicApplet.store_profile=p4vasp.applet.ElectronicApplet.ElectronicApplet-class.html#store_profile,Variable p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet.store_profile=p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet-class.html#store_profile,Variable p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet.store_profile=p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet-class.html#store_profile,Variable p4vasp.applet.ExportApplet.ExportApplet.store_profile=p4vasp.applet.ExportApplet.ExportApplet-class.html#store_profile,Variable p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet.store_profile=p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet-class.html#store_profile,Variable p4vasp.applet.GraphWindowApplet.GraphWindowApplet.store_profile=p4vasp.applet.GraphWindowApplet.GraphWindowApplet-class.html#store_profile,Variable p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet.store_profile=p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet-class.html#store_profile,Variable p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet.store_profile=p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet-class.html#store_profile,Variable p4vasp.applet.MeasureApplet.MeasureApplet.store_profile=p4vasp.applet.MeasureApplet.MeasureApplet-class.html#store_profile,Variable p4vasp.applet.MoveApplet.MoveApplet.store_profile=p4vasp.applet.MoveApplet.MoveApplet-class.html#store_profile,Variable p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet.store_profile=p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet-class.html#store_profile,Variable p4vasp.applet.NewApplet.NewApplet.store_profile=p4vasp.applet.NewApplet.NewApplet-class.html#store_profile,Variable p4vasp.applet.RotateApplet.RotateApplet.store_profile=p4vasp.applet.RotateApplet.RotateApplet-class.html#store_profile,Variable p4vasp.applet.STMWindowApplet.STMWindowApplet.store_profile=p4vasp.applet.STMWindowApplet.STMWindowApplet-class.html#store_profile,Variable p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.store_profile=p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet-class.html#store_profile,Variable p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet.store_profile=p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet-class.html#store_profile,Variable p4vasp.applet.SelectionApplet.SelectionApplet.store_profile=p4vasp.applet.SelectionApplet.SelectionApplet-class.html#store_profile,Variable p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.store_profile=p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet-class.html#store_profile,Variable p4vasp.applet.StructureApplet.StructureApplet.store_profile=p4vasp.applet.StructureApplet.StructureApplet-class.html#store_profile,Variable p4vasp.applet.StructureWindowApplet.StructureWindowApplet.store_profile=p4vasp.applet.StructureWindowApplet.StructureWindowApplet-class.html#store_profile,Variable p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.store_profile=p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet-class.html#store_profile,Variable p4vasp.applet.VACApplet.VACApplet.store_profile=p4vasp.applet.VACApplet.VACApplet-class.html#store_profile"><a title="p4vasp.SystemPM.SystemRepository.store_profile
p4vasp.applet.Applet.Applet.store_profile
p4vasp.applet.AppletFactory.store_profile
p4vasp.applet.AppletRepository.store_profile
p4vasp.applet.BuilderApplet.BuilderApplet.store_profile
p4vasp.applet.DielectricApplet.DielectricApplet.store_profile
p4vasp.applet.EditSubZMatApplet.EditSubZMatApplet.store_profile
p4vasp.applet.ElectronicApplet.ElectronicApplet.store_profile
p4vasp.applet.ElectronicControlApplet.ElectronicControlApplet.store_profile
p4vasp.applet.EnergyConvergenceApplet.EnergyConvergenceApplet.store_profile
p4vasp.applet.ExportApplet.ExportApplet.store_profile
p4vasp.applet.ForcesConvergenceApplet.ForcesConvergenceApplet.store_profile
p4vasp.applet.GraphWindowApplet.GraphWindowApplet.store_profile
p4vasp.applet.KpointsViewerApplet.KpointsViewerApplet.store_profile
p4vasp.applet.LocalPotentialApplet.LocalPotentialApplet.store_profile
p4vasp.applet.MeasureApplet.MeasureApplet.store_profile
p4vasp.applet.MoveApplet.MoveApplet.store_profile
p4vasp.applet.MultiplyCellApplet.MultiplyCellApplet.store_profile
p4vasp.applet.NewApplet.NewApplet.store_profile
p4vasp.applet.RotateApplet.RotateApplet.store_profile
p4vasp.applet.STMWindowApplet.STMWindowApplet.store_profile
p4vasp.applet.STMWindowControlApplet.STMWindowControlApplet.store_profile
p4vasp.applet.SelForcesConvergenceApplet.SelForcesConvergenceApplet.store_profile
p4vasp.applet.SelectionApplet.SelectionApplet.store_profile
p4vasp.applet.ShowHideControlApplet.ShowHideControlApplet.store_profile
p4vasp.applet.StructureApplet.StructureApplet.store_profile
p4vasp.applet.StructureWindowApplet.StructureWindowApplet.store_profile
p4vasp.applet.StructureWindowControlApplet.StructureWindowControlApplet.store_profile
p4vasp.applet.VACApplet.VACApplet.store_profile" class="py-name" href="#" onclick="return doclink('link-341', 'store_profile', 'link-341');">store_profile</a></tt><tt class="py-op">=</tt><tt id="link-342" class="py-name" targets="Class p4vasp.applet.Applet.AppletProfile=p4vasp.applet.Applet.AppletProfile-class.html"><a title="p4vasp.applet.Applet.AppletProfile" class="py-name" href="#" onclick="return doclink('link-342', 'AppletProfile', 'link-342');">AppletProfile</a></tt><tt class="py-op">(</tt><tt id="link-343" class="py-name"><a title="p4vasp.applet.STMWindowApplet
p4vasp.applet.STMWindowApplet.STMWindowApplet" class="py-name" href="#" onclick="return doclink('link-343', 'STMWindowApplet', 'link-238');">STMWindowApplet</a></tt><tt class="py-op">,</tt><tt class="py-name">tagname</tt><tt class="py-op">=</tt><tt class="py-string">"STMWindow"</tt><tt class="py-op">,</tt> </tt>
<a name="L582"></a><tt class="py-lineno">582</tt>  <tt class="py-line"><tt class="py-name">attr_setup</tt><tt class="py-op">=</tt><tt class="py-string">"""</tt> </tt>
<a name="L583"></a><tt class="py-lineno">583</tt>  <tt class="py-line"><tt class="py-string">int    dir</tt> </tt>
<a name="L584"></a><tt class="py-lineno">584</tt>  <tt class="py-line"><tt class="py-string">int    n</tt> </tt>
<a name="L585"></a><tt class="py-lineno">585</tt>  <tt class="py-line"><tt class="py-string">float  value</tt> </tt>
<a name="L586"></a><tt class="py-lineno">586</tt>  <tt class="py-line"><tt class="py-string">float  sh</tt> </tt>
<a name="L587"></a><tt class="py-lineno">587</tt>  <tt class="py-line"><tt class="py-string">float  sv</tt> </tt>
<a name="L588"></a><tt class="py-lineno">588</tt>  <tt class="py-line"><tt class="py-string">int    n1</tt> </tt>
<a name="L589"></a><tt class="py-lineno">589</tt>  <tt class="py-line"><tt class="py-string">int    n2</tt> </tt>
<a name="L590"></a><tt class="py-lineno">590</tt>  <tt class="py-line"><tt class="py-string">int    n3</tt> </tt>
<a name="L591"></a><tt class="py-lineno">591</tt>  <tt class="py-line"><tt class="py-string">string chgname</tt> </tt>
<a name="L592"></a><tt class="py-lineno">592</tt>  <tt class="py-line"><tt class="py-string">float  lo</tt> </tt>
<a name="L593"></a><tt class="py-lineno">593</tt>  <tt class="py-line"><tt class="py-string">float  hi</tt> </tt>
<a name="L594"></a><tt class="py-lineno">594</tt>  <tt class="py-line"><tt class="py-string">int    inv</tt> </tt>
<a name="L595"></a><tt class="py-lineno">595</tt>  <tt class="py-line"><tt class="py-string">int    clamp_type</tt> </tt>
<a name="L596"></a><tt class="py-lineno">596</tt>  <tt class="py-line"><tt class="py-string">int    src</tt> </tt>
<a name="L597"></a><tt class="py-lineno">597</tt>  <tt class="py-line"><tt class="py-string">int    mode</tt> </tt>
<a name="L598"></a><tt class="py-lineno">598</tt>  <tt class="py-line"><tt class="py-string">int    interpolation</tt> </tt>
<a name="L599"></a><tt class="py-lineno">599</tt>  <tt class="py-line"><tt class="py-string">int    postinterpolation</tt> </tt>
<a name="L600"></a><tt class="py-lineno">600</tt>  <tt class="py-line"><tt class="py-string">float  postsigma</tt> </tt>
<a name="L601"></a><tt class="py-lineno">601</tt>  <tt class="py-line"><tt class="py-string">int    postn</tt> </tt>
<a name="L602"></a><tt class="py-lineno">602</tt>  <tt class="py-line"><tt class="py-string">float  brightness</tt> </tt>
<a name="L603"></a><tt class="py-lineno">603</tt>  <tt class="py-line"><tt class="py-string">float  contrast</tt> </tt>
<a name="L604"></a><tt class="py-lineno">604</tt>  <tt class="py-line"><tt class="py-string">"""</tt><tt class="py-op">)</tt> </tt>
<a name="L605"></a><tt class="py-lineno">605</tt>  <tt class="py-line"> </tt>
<a name="L606"></a><tt class="py-lineno">606</tt>  <tt class="py-line"><tt class="py-comment">#DOSApplet.config_profile=AppletProfile(TDOSApplet,tagname="TDOS")</tt> </tt>
<a name="L607"></a><tt class="py-lineno">607</tt>  <tt class="py-line"> </tt><script type="text/javascript">
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</pre>
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